Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0809
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   9.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 172 TRLNYFWGLLFQITRFTFLYVSAQLGKLIIYLLLFC 65
           T  N FW  L+ +T   FL+    +  LII L+L+C
Sbjct: 227 TLANTFWSALYFLT-IIFLFF---IIPLIILLILYC 258


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 341 ITILRFVNKIGFKKLLIVYY 282
           I IL +VNK  F KLLI  Y
Sbjct: 104 IEILGYVNKAKFGKLLINLY 123


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -3

Query: 423  RRDRATGVRNTIQRVDHGDFTVLPPVKNHHPSI 325
            R    T +RN +     G    +PP+    PS+
Sbjct: 1753 RHPLLTTIRNVLADAGTGQQETIPPIDEEPPSV 1785


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -2

Query: 166 LNYFWGLLFQITRFTFLYVSAQLGKLIIYLLLFC*VYRLV 47
           LN F+ ++FQ+    +L+ +  L  +  ++ L   + RLV
Sbjct: 294 LNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLV 333


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 74  QQIND*FTQLRTHIQKSKTSYLKEEAP 154
           +Q+N+ F  LR HI  S  +    + P
Sbjct: 99  KQVNNGFATLRQHIPASVAAAFAPQGP 125


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 335 ILRFVNKIGFKKLL 294
           IL ++NK  FKK++
Sbjct: 381 ILSYINKASFKKIV 394


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -1

Query: 338 TILRFVNKIGFKKLLIVYYL*VFMVFN*PVLSI--TTGRTFLTLDDILI*FP*NTY 177
           ++  F+N +  +KLL  +Y+   +    P L++  T       L+++L   P +TY
Sbjct: 369 SVYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRILNNLLDKKPYSTY 424


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -1

Query: 338 TILRFVNKIGFKKLLIVYYL*VFMVFN*PVLSI--TTGRTFLTLDDILI*FP*NTY 177
           ++  F+N +  +KLL  +Y+   +    P L++  T       L+++L   P +TY
Sbjct: 261 SVYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRILNNLLDKKPYSTY 316


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 242 ITTGRTFLTLDDI 204
           ITTG  F+ LD+I
Sbjct: 132 ITTGVNFMKLDEI 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,184
Number of Sequences: 336
Number of extensions: 1999
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)