Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0809
         (452 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1123|AAF58778.4|  963|Drosophila melanogaster CG12052-P...    27   8.9  
AB107345-1|BAC67650.1|  963|Drosophila melanogaster Lola protein...    27   8.9  
AB107325-1|BAC67630.1|  963|Drosophila melanogaster Lola protein...    27   8.9  
AB107305-1|BAC67610.1|  963|Drosophila melanogaster Lola protein...    27   8.9  
AB107285-1|BAC67590.1|  963|Drosophila melanogaster Lola protein...    27   8.9  

>AE013599-1123|AAF58778.4|  963|Drosophila melanogaster CG12052-PP,
           isoform P protein.
          Length = 963

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 EAPKII*SCLRRYSMEIKLKCHLKLKTFVP 235
           E P +  +C R Y  +  LKCHLK +  +P
Sbjct: 846 EKPWVCRNCNRTYKWKNSLKCHLKNECGLP 875


>AB107345-1|BAC67650.1|  963|Drosophila melanogaster Lola protein
           isoform N protein.
          Length = 963

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 EAPKII*SCLRRYSMEIKLKCHLKLKTFVP 235
           E P +  +C R Y  +  LKCHLK +  +P
Sbjct: 846 EKPWVCRNCNRTYKWKNSLKCHLKNECGLP 875


>AB107325-1|BAC67630.1|  963|Drosophila melanogaster Lola protein
           isoform N protein.
          Length = 963

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 EAPKII*SCLRRYSMEIKLKCHLKLKTFVP 235
           E P +  +C R Y  +  LKCHLK +  +P
Sbjct: 846 EKPWVCRNCNRTYKWKNSLKCHLKNECGLP 875


>AB107305-1|BAC67610.1|  963|Drosophila melanogaster Lola protein
           isoform N protein.
          Length = 963

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 EAPKII*SCLRRYSMEIKLKCHLKLKTFVP 235
           E P +  +C R Y  +  LKCHLK +  +P
Sbjct: 846 EKPWVCRNCNRTYKWKNSLKCHLKNECGLP 875


>AB107285-1|BAC67590.1|  963|Drosophila melanogaster Lola protein
           isoform N protein.
          Length = 963

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 146 EAPKII*SCLRRYSMEIKLKCHLKLKTFVP 235
           E P +  +C R Y  +  LKCHLK +  +P
Sbjct: 846 EKPWVCRNCNRTYKWKNSLKCHLKNECGLP 875


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,050,922
Number of Sequences: 53049
Number of extensions: 333184
Number of successful extensions: 889
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)