Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0808
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 90 1e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 70 2e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 6e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 3e-06
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 43 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.54
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.54
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.3
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.7
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.7
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 30 1.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.7
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 2.2
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.2
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 2.9
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27) 28 5.1
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 6.7
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.7
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 6.7
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 6.7
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 6.7
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.7
SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06) 27 8.8
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.8
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 27 8.8
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 94/117 (80%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T VPIYEGY+L
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYAL 172
Score = 114 bits (274), Expect = 6e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 94/117 (80%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T VPIYEGY+L
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYAL 171
Score = 111 bits (267), Expect = 4e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 94/117 (80%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T VPIYEGY+L
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYAL 171
Score = 112 bits (270), Expect = 2e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 94/117 (80%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T VPIYEGY+L
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYAL 172
Score = 118 bits (285), Expect = 3e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 4e-47
Identities = 95/118 (80%), Positives = 98/118 (83%), Gaps = 3/118 (2%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYE--GYS 601
REKMTQIMFETFN+PAMYVAIQAV S + + VS T VPIYE GYS
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHT-VPIYEERGYS 173
Score = 114 bits (274), Expect = 6e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 112 bits (270), Expect = 2e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 434 NREKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
N + M +IMFETFN+PAMYVAIQAV S + + V+ T VPIYEGY+L
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYAL 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFHT 576
+SLYASGRTTGIV+DSGDGV HT
Sbjct: 103 LSLYASGRTTGIVMDSGDGVTHT 125
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.1 bits (236), Expect = 2e-21
Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 388
S + G + L+ DEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATV 565
VLLTE PLNP NREKM ++MFE + +Y+AIQAV + + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 566 SSTPVPIYEGYSL 604
+ P+YEG++L
Sbjct: 164 THI-CPVYEGFAL 175
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 108 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 89.8 bits (213), Expect = 1e-18
Identities = 45/88 (51%), Positives = 57/88 (64%)
Frame = +2
Query: 341 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCT 520
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 521 RPVVPPVSCWTPATVSSTPVPIYEGYSL 604
+ + S VP+Y+GY L
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWL 2216
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +2
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVS 568
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 569 STPVPIYEGYSL 604
S VPIYEG+++
Sbjct: 186 SHSVPIYEGFAM 197
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 478
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 479 PAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
PA ++ +V ++ VP+++GY L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 84 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 406
DEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFH 573
+SLYASGRTTG+V DSGDGV H
Sbjct: 19 LSLYASGRTTGVVFDSGDGVSH 40
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +2
Query: 455 IMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
IMFE FN+PA+YVAIQAV + S VPIYEGY+L
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYAL 50
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 212 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 96
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 215 GRDGRYGTEGLLCRDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 385
GR G + GL ++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 386 EEHPVLLTEAPLNPKANRE 442
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 507
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 333 SSQLVTI--PCSMGYLRV-RIPLLLCASSLHKSPSVPYRP 223
S LV++ P S Y + RIP LC SL PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNE 370
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAV 182
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 182 VPLDRGKAPPSGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 355
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 356 TFYN 367
T N
Sbjct: 497 TCPN 500
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 365 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVS 544
N L++ PE + VL + LN AN + A V A + P VP
Sbjct: 157 NTLKITPENY-VLTNKQTLNLIANNALLVNTASPHTAHRAFIVTTCASTSTESPAVPVKP 215
Query: 545 CWTPATVSSTPVPI 586
TP + P PI
Sbjct: 216 ASTPTFAKNAPTPI 229
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -2
Query: 393 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSL--HKSPSVPYRPS 220
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 219 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 127
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 449 TQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTP 577
+Q+ E +N P+ + + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 321 VTIPCSMGYLRVRIPLLLCASSLHKSPSVP 232
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
Length = 1373
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 491 VAIQAVSRCTRPVVPPVSCWTPAT-VSSTPVP 583
VA QA S +PV P V TP T VSS+ VP
Sbjct: 1187 VATQAASSPVQPVTPQVRPATPTTPVSSSAVP 1218
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 462 SKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
S S R P T+PS PC V S Y AG
Sbjct: 492 SGSSAREPSTAPSLPCDLVAATSAKMYLAG 521
>SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 476 TPAMYVAIQAVSRCTRPVV--PPVSCWTPATVSSTPVPI 586
T A + + + PVV P V+ P T SSTPVPI
Sbjct: 210 TSASVLTTLLTDKASLPVVTAPKVNNTRPVTASSTPVPI 248
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 202 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 92
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06)
Length = 230
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 285 RIPLLLCASSLHKSPSVPYRP 223
RIP L SL SPS PY+P
Sbjct: 80 RIPTSLSLISLQSSPSYPYKP 100
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 362 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSR 514
Y +L V +PV T+ + + N + TQ+M T P Y + +R
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLMVFTR 166
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 260 HLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 144
H+ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 285 RIPLLLCASSLHKSPSVPYRP 223
RIP L SL SPS PY+P
Sbjct: 57 RIPTSLSLISLQSSPSYPYKP 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,546,898
Number of Sequences: 59808
Number of extensions: 556320
Number of successful extensions: 2303
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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