Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0808
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 190 6e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 190 8e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 190 8e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 188 2e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 187 4e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 187 4e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 187 4e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 187 4e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 187 4e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 170 7e-43
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 5e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 157 7e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 5e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 91 4e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 4e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 3e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 8e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 30 1.4
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 2.4
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 29 2.4
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 4.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.5
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 28 5.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.6
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 27 9.6
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.6
At2g19030.1 68415.m02223 rapid alkalinization factor (RALF) fami... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 190 bits (463), Expect = 6e-49
Identities = 95/117 (81%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFNTPAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 8e-49
Identities = 95/117 (81%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFNTPAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 8e-49
Identities = 95/117 (81%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFNTPAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 188 bits (458), Expect = 2e-48
Identities = 94/117 (80%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN PAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 93/117 (79%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN PAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 92/117 (78%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + VS T VPIYEG+SL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSL 173
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 187 bits (456), Expect = 4e-48
Identities = 92/117 (78%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + VS T VPIYEG+SL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSL 173
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 93/117 (79%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN PAMYVAIQAV S + + VS T VPIYEGY+L
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL 173
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 92/117 (78%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFETFN+PAMYVAIQAV S + + VS T VPIYEG+SL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSL 173
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 170 bits (413), Expect = 7e-43
Identities = 81/117 (69%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
REKMTQIMFE+F P+MY+ IQAV S + + + VS T VPIYEGY+L
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYAL 174
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++V
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFV 57
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (381), Expect = 5e-39
Identities = 74/120 (61%), Positives = 89/120 (74%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
L D+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 425 PKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTPVPIYEGYSL 604
PKA+REKMTQIMFETF P+MY+ +QA + S VPIYEG +L
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSAL 128
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 157 bits (380), Expect = 7e-39
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 397
RDG E + +E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 398 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRC-TRPVVPPVSCWTPATVSST 574
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+V + V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 575 PVPIYEGYSL 604
VP+YEGY+L
Sbjct: 154 -VPVYEGYAL 162
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYV
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYV 45
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (241), Expect = 5e-22
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 284 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 463
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 464 ETFNTPAMYVAIQAV 508
E +N +++ IQAV
Sbjct: 126 EKYNFAGVFIQIQAV 140
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYV-----EMRHR 269
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD V E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
Score = 35.1 bits (77), Expect = 0.036
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFH 573
++LYA G TG+V+DSGDGV H
Sbjct: 141 LTLYAQGLLTGLVIDSGDGVTH 162
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 DEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 427
DEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P
Sbjct: 72 DEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Query: 428 KANREKMTQIMFETFNTPAMYVAIQAV 508
+RE +I+FETFN P +Y+A+ +V
Sbjct: 132 PESREYTGEILFETFNVPGLYIAVNSV 158
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.4 bits (192), Expect = 4e-16
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 451
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 452 QIMFETFNTPAMYVAIQAV--SRCT-RPVVPPVSCWTPATVSSTPVPIYEGYSL 604
++MFE + PA+++A V S T R V C +T S P+++GY L
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTIS---PVHDGYVL 195
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 445
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 475
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 476 TPAMYVAIQAV 508
Y + QAV
Sbjct: 117 VSGFYASEQAV 127
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 203
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 290 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 469
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 470 FNTPAMYVA 496
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 475
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 476 TPAMYVAIQA 505
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 235 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 98
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 412 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRVSLY 519
GSP+ +G + E+D D + NI+H + +H + LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 188 LDRGKAPPSGRDGR--YGTEGLLCRDEAQSKRGILTLK 295
L+RG+ S R GR +G G RD+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSG--SRDKAQSRRSKISLK 461
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 421 QPQGQQREDDPDHVRNIQHARHVRRHPSRVSLYASGRTTGIVLDSGDG 564
QP+G+ E+ + NI+ A + V + + G+ +G VL+ G+G
Sbjct: 374 QPEGKVSENVLEGGDNIEFAEKEKDTTDSVQIESEGKVSGNVLEGGEG 421
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 530 VPPVSCWTPATVSSTPVPIYE 592
+PPV+ TP+ ++S PVP+ E
Sbjct: 38 LPPVTAETPSPIASPPVPVNE 58
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 345 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 256
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 563 PSPESSTIPVVRPDAYSETRL 501
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 211 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 89
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 406 H*GSPQPQGQQREDDPDHVRN 468
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 EGLLCRDEAQSKRGILTLKYPIE-HGIVTNWDDMEKIWHHTFY 364
+GLL RD+ S + LK+ + T +D +WH FY
Sbjct: 14 QGLLQRDKHNSCSPFVELKFDNQIFRATTKHNDPNPVWHECFY 56
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 323 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 472
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g19030.1 68415.m02223 rapid alkalinization factor (RALF) family
protein
Length = 72
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 488 YVAIQAVSRCTRPVVPPVSCWTPATVSSTPVPIYE 592
Y+ A+++C P PP C P P P+ E
Sbjct: 25 YIEYGAINKCAGPNPPP-GCNPPGAEQKNPTPVNE 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,193,163
Number of Sequences: 28952
Number of extensions: 361961
Number of successful extensions: 1149
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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