Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0807
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 6e-05
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 44 1e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 38 0.009
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.016
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.021
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 36 0.021
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.028
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.065
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.065
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.20
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.46
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.60
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.80
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.8
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 3.2
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.2
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 5.6
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.6
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.6
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.6
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.4
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.8
SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35) 27 9.8
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 9.8
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 9.8
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +1
Query: 259 APIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 435
APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN IRYFPTQ
Sbjct: 28 APIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQ 87
Query: 436 ALNFAFKDKYKQVF 477
ALNFAFKD+ K +F
Sbjct: 88 ALNFAFKDQVKALF 101
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/30 (63%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 558 SLCFVYPLDFARTRLAAD--VGKGDGQREF 641
SL FVY LD+ RTRLA D VGK G+R+F
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQF 156
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 328 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 480
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/72 (41%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 435
V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVIR FP
Sbjct: 52 VSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYS 105
Query: 436 ALNFAFKDKYKQ 471
A+ FA ++YK+
Sbjct: 106 AVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = +1
Query: 259 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 438
AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANVI+ P
Sbjct: 155 APLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESG 208
Query: 439 LNFAFKDKYKQVFLGGVDKK 498
+ F +K K+ L G D K
Sbjct: 209 IKFFAYEKAKK--LVGSDTK 226
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 286 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 465
L+V I +Y+G++ A I +++G+ SF+RG F +++ P ++ A +
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310
Query: 466 KQVFL 480
K +L
Sbjct: 311 KNFYL 315
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 286 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 450
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 429
V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + + FP
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 APIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 396
APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 29 APIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 435
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 436 ALNF 447
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 328 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 447
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 328 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 471
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 313 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 477
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 435
V PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++ P +
Sbjct: 931 VYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 436 ALNFAFKDKYKQVF 477
A+ D + +F
Sbjct: 989 AIKLTTNDFVRGIF 1002
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 331 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 480
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 441
P++ K +Q + I YKG +D RI + +G+ + W+G R P L
Sbjct: 113 PVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVL 169
Query: 442 NFAFKDKYKQV---FLGG 486
F F ++ + F GG
Sbjct: 170 TFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 340 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 474
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 399
V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 259 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 399
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 343 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 468
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 331 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 501
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.065
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 441
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 442 NFAFKDKYKQV 474
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 361 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 474
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 438
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 361 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 474
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 441
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 442 NF 447
F
Sbjct: 99 TF 100
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 441
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 442 NFAFKDKYKQVFLGGVDKKTQF 507
FA + K K TQF
Sbjct: 116 RFAVFEYLKNKMADENGKLTQF 137
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 237 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 103
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 235 RRRLQDRVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 402
+R+ + VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 275 KRQSRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 429
+ P++RVK +LQ++ + Y G VD RI +E G+ ++G +R P
Sbjct: 155 LTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 441
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 442 NFA 450
F+
Sbjct: 117 LFS 119
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 217 PGWRYLRRRLQDRVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 381
P WR++ VA P++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 382 LSFWRGNFANVIRYFP 429
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 429
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 237 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 103
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 262 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 399
P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 134 PTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 256 VAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 399
+ P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 47 ILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 337 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 474
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 256 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 429
V P++ +K LQ+ + + + Y GI+D +I +GL +F++G +I P
Sbjct: 223 VNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVIAP 277
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 383
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 383
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 383
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 364 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 480
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 383
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 499 SSCQRRRGTPACTCP 455
S CQRRRG C CP
Sbjct: 942 SKCQRRRGGAQCVCP 956
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 361 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 477
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 361 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 474
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 10 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 153
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 58 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 168
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)
Length = 374
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 627 HLPYRHRRQDGYVRSQGGTRSTERWLRRHHRRPDYQRSNA 508
H+ R + G+ RSQ T S RWL + R Y + A
Sbjct: 296 HVVEVRRAEPGHHRSQAFTESFHRWLAQRLFRAQYSKELA 335
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 383
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 37 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 159
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,661,082
Number of Sequences: 59808
Number of extensions: 442194
Number of successful extensions: 1564
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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