Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0803
         (339 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034980-1|AAH34980.1|  603|Homo sapiens Unknown (protein for IM...    30   2.1  
AK000832-1|BAA91393.1|  160|Homo sapiens protein ( Homo sapiens ...    29   3.7  
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq...    28   6.4  
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio...    28   6.4  
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.             28   6.4  
BC029358-1|AAH29358.1|  629|Homo sapiens GPR110 protein protein.       28   8.5  
AY140952-1|AAN46666.1|  713|Homo sapiens G-protein coupled recep...    28   8.5  
AL355518-2|CAI13874.1|  911|Homo sapiens protein ( Human DNA seq...    28   8.5  
AB045123-1|BAD83599.1|  910|Homo sapiens KPG_012 protein protein.      28   8.5  

>BC034980-1|AAH34980.1|  603|Homo sapiens Unknown (protein for
           IMAGE:4824581) protein.
          Length = 603

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +2

Query: 134 TTKTAPTLMAMKPPMDPS-RSRLNRK-QVM*RANMDTRTTLATTSD*VRCQQIRIPASRR 307
           +TK+  T  A  P   PS RSR+  K +   R + DTRT+ A+ +  VRC Q R   S R
Sbjct: 72  STKSTSTKRA--PSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHS-R 128

Query: 308 GHAP 319
           G  P
Sbjct: 129 GRTP 132


>AK000832-1|BAA91393.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20825 fis, clone ADSE00160. ).
          Length = 160

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +3

Query: 204 ASR*CEGQIWIQGRHWQLRVIEYGANKYGFQPAGEGMHRC 323
           + R C G  W Q +  Q+     GA   G    G G HRC
Sbjct: 58  SGRTCSGHRWAQVQWAQVGTRAVGARAVGASAVGTGGHRC 97


>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
           sequence from clone RP4-669P10 on chromosome
           22q13.31-13.33.  ).
          Length = 1960

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 127 NRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGN 255
           + HN +G+   G+ AA   F   T+        +Y YKD  G+
Sbjct: 673 SNHNGEGNGQSGHSAAGPGFTSRTEPSKSPGSLRYSYKDSFGS 715


>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
           factor 20 (AR1, KIAA0292)) protein.
          Length = 1641

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 127 NRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGN 255
           + HN +G+   G+ AA   F   T+        +Y YKD  G+
Sbjct: 429 SNHNGEGNGQSGHSAAGPGFTSRTEPSKSPGSLRYSYKDSFGS 471


>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
          Length = 1716

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 127 NRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGN 255
           + HN +G+   G+ AA   F   T+        +Y YKD  G+
Sbjct: 429 SNHNGEGNGQSGHSAAGPGFTSRTEPSKSPGSLRYSYKDSFGS 471


>BC029358-1|AAH29358.1|  629|Homo sapiens GPR110 protein protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 175 DGSFKIETKSQAGDVKGKYGYKDD 246
           DGSF++  K+Q  D+   +G KDD
Sbjct: 246 DGSFRVFGKAQCNDIVFGFGSKDD 269


>AY140952-1|AAN46666.1|  713|Homo sapiens G-protein coupled receptor
           GPR110 protein.
          Length = 713

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 175 DGSFKIETKSQAGDVKGKYGYKDD 246
           DGSF++  K+Q  D+   +G KDD
Sbjct: 49  DGSFRVFGKAQCNDIVFGFGSKDD 72


>AL355518-2|CAI13874.1|  911|Homo sapiens protein ( Human DNA
           sequence from clone RP11-39C2 on chromosome 6 Contains
           thegene for a novel protein.  ).
          Length = 911

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 175 DGSFKIETKSQAGDVKGKYGYKDD 246
           DGSF++  K+Q  D+   +G KDD
Sbjct: 247 DGSFRVFGKAQCNDIVFGFGSKDD 270


>AB045123-1|BAD83599.1|  910|Homo sapiens KPG_012 protein protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 175 DGSFKIETKSQAGDVKGKYGYKDD 246
           DGSF++  K+Q  D+   +G KDD
Sbjct: 246 DGSFRVFGKAQCNDIVFGFGSKDD 269


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.130    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,548,273
Number of Sequences: 237096
Number of extensions: 1154852
Number of successful extensions: 1862
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)