Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0803
(339 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31120.1 68414.m03808 potassium transporter family protein si... 31 0.20
At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly ide... 29 1.0
At5g13740.1 68418.m01599 sugar transporter family protein contai... 27 2.4
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 27 3.2
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 27 3.2
At3g45420.1 68416.m04903 lectin protein kinase family protein co... 27 4.2
At2g13360.2 68415.m01475 serine-glyoxylate aminotransferase-rela... 27 4.2
At2g13360.1 68415.m01474 serine-glyoxylate aminotransferase-rela... 27 4.2
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 26 5.6
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 26 5.6
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 26 5.6
At2g35060.1 68415.m04301 potassium transporter family protein si... 26 5.6
At5g40260.1 68418.m04884 nodulin MtN3 family protein similar to ... 26 7.4
At1g60810.1 68414.m06845 ATP citrate-lyase -related similar to A... 26 7.4
At1g10670.2 68414.m01213 expressed protein 26 7.4
At1g10670.1 68414.m01212 expressed protein 26 7.4
At1g49590.1 68414.m05560 formin-binding protein-related similar ... 25 9.7
At1g12000.1 68414.m01386 pyrophosphate--fructose-6-phosphate 1-p... 25 9.7
>At1g31120.1 68414.m03808 potassium transporter family protein
similar to HAK2 [Hordeum vulgare] GI:7108599, potassium
transporter [Arabidopsis thaliana]
gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
member, PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 796
Score = 31.1 bits (67), Expect = 0.20
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -1
Query: 231 IFALHITCLRFSLDL-EGSIGGFIAISVGAVFVVSVYLFQYGHRRGDFFRLSGYVSRGAV 55
+ +L + C FS L + + GG++ + + A F+V +Y++ YG + F + VS +
Sbjct: 486 LLSLVVECTYFSAVLFKVNQGGWVPLVIAAAFLVIMYVWHYGTLKRYEFEMHSKVSMAWI 545
Query: 54 L 52
L
Sbjct: 546 L 546
>At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly
identical to potassium transporter KUP3p [Arabidopsis
thaliana] gi|6742169|gb|AAF19432; similar to tiny root
hair 1 protein [Arabidopsis thaliana]
gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family
member, PMID:11500563
Length = 789
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 174 GGFIAISVGAVFVVSVYLFQYGHRRGDFFRLSGYVS 67
GG++ + +F++++Y++ YG RR F L VS
Sbjct: 478 GGWVPFVLTFIFMIAMYVWHYGTRRKYSFDLHNKVS 513
>At5g13740.1 68418.m01599 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 486
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 299 WLESVFVGTVLNHS*LPVSSLYPYL 225
+LE FV ++ + LP+SSLYP+L
Sbjct: 36 YLELSFVWIIVLSTSLPISSLYPFL 60
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 195 LDLEGSIGGFIAISVGAVFVVSVYLFQYGHR-RGDFFRLSGYVSRG 61
+DL GS+G A G VF L +YG +G F + G+ + G
Sbjct: 173 IDLGGSLGREAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVG 218
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 91 EVSTPVPILKQINRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGNYE*LS 270
EVS PV L N+ +E+ + TY +G K K + KY Y +G + +
Sbjct: 93 EVSVPVKELLDQNKGDEEKTVTYAVRLPNGKAKGSLKF-SFKFGEKYTYGSSSGPHAPVP 151
Query: 271 TVPTNTDSSQPARA 312
+ + QP A
Sbjct: 152 SAMDHKTMDQPVTA 165
>At3g45420.1 68416.m04903 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108
Length = 667
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -1
Query: 219 HITCLRFSLDLEGSIGGFIA--ISVGAVFVVS-VYLFQYGHRRGDFFRLSGYVSRGAV 55
HI R S D E + F+A +++G + + V L Y R+G+ +S Y+S G++
Sbjct: 374 HIAVKRLSHDAEQGMKQFVAEVVTMGNIQHRNLVPLLGYCRRKGELLLVSEYMSNGSL 431
>At2g13360.2 68415.m01475 serine-glyoxylate aminotransferase-related
similar to serine-glyoxylate aminotransferase
(GI:21535798)[Methylobacterium dichloromethanicum;
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V]
Length = 401
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 85 PKEVSTPVPILKQINRHNED 144
P V+ P P+++ +NR+NED
Sbjct: 15 PGPVNIPEPVIRAMNRNNED 34
>At2g13360.1 68415.m01474 serine-glyoxylate aminotransferase-related
similar to serine-glyoxylate aminotransferase
(GI:21535798)[Methylobacterium dichloromethanicum;
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V]
Length = 401
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 85 PKEVSTPVPILKQINRHNED 144
P V+ P P+++ +NR+NED
Sbjct: 15 PGPVNIPEPVIRAMNRNNED 34
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 213 TCLRFSLDLEGSIGGFIAISVGAVFVVSVYLFQY 112
T R L+G IGG I S A+ YLF Y
Sbjct: 487 TLPRLRTSLDGKIGGIIQFSYDALCDEDKYLFLY 520
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 213 TCLRFSLDLEGSIGGFIAISVGAVFVVSVYLFQY 112
T R L+G IGG I S A+ YLF Y
Sbjct: 487 TLPRLRTSLDGKIGGIIQFSYDALCDEDKYLFLY 520
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 213 TCLRFSLDLEGSIGGFIAISVGAVFVVSVYLFQY 112
T R L+G IGG I S A+ YLF Y
Sbjct: 487 TLPRLRTSLDGKIGGIIQFSYDALCDEDKYLFLY 520
>At2g35060.1 68415.m04301 potassium transporter family protein
similar to HAK2 [Hordeum vulgare] GI:7108599, potassium
transporter HAK2p [Mesembryanthemum crystallinum]
gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family
member, PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 792
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 231 IFALHITCLRFSLDL-EGSIGGFIAISVGAVFVVSVYLFQYGHRRGDFFRLSGYVSRGAV 55
+ +L + C FS L + GG++ + + A F++ ++++ YG + F + VS +
Sbjct: 487 VLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVSMAWI 546
Query: 54 L 52
L
Sbjct: 547 L 547
>At5g40260.1 68418.m04884 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 239
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 144 VFVVSVYLFQYGHRRGDFFRLSGYVSRGAVLIV 46
+F V VYL GH++ + G+++ +L+V
Sbjct: 84 LFYVGVYLMYCGHKKNHRRNILGFLALEVILVV 116
>At1g60810.1 68414.m06845 ATP citrate-lyase -related similar to ATP
citrate-lyase GI:949989 from [Rattus norvegicus]
Length = 423
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 DVKGKYGYKDDTGNYE*LSTVPTNTDSSQPAR-ACTVAASNP 336
D G GY + GNY S P + Q AR A +NP
Sbjct: 287 DTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANP 328
>At1g10670.2 68414.m01213 expressed protein
Length = 423
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 DVKGKYGYKDDTGNYE*LSTVPTNTDSSQPAR-ACTVAASNP 336
D G GY + GNY S P + Q AR A +NP
Sbjct: 287 DTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANP 328
>At1g10670.1 68414.m01212 expressed protein
Length = 423
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 DVKGKYGYKDDTGNYE*LSTVPTNTDSSQPAR-ACTVAASNP 336
D G GY + GNY S P + Q AR A +NP
Sbjct: 287 DTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANP 328
>At1g49590.1 68414.m05560 formin-binding protein-related similar to
formin binding protein 21 (GI:3550080) [Homo sapiens];
similar to formin binding protein 21 (GI:3550077) [Mus
musculus]; similar to Dinap1-interacting protein 1
(GI:8745458) [Crypthecodinium cohnii]
Length = 242
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 88 KEVSTPVPILKQINRHNEDGSYTYGYEAADGSFKIETKSQAGDVKGKYGYKDDTGNY 258
K+++T + K N EDG+ + ++A G + +T D + + Y D G++
Sbjct: 78 KDIATAQQVAKA-NGAPEDGTSDWMLDSASGYYYNQTNGLHYDSQSGFYYSDSIGHW 133
>At1g12000.1 68414.m01386 pyrophosphate--fructose-6-phosphate
1-phosphotransferase beta subunit, putative /
pyrophosphate-dependent 6-phosphofructose-1-kinase,
putative strong similarity to SP|Q41141
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase
beta subunit (EC 2.7.1.90) (PFP) ((PPI-PFK) {Ricinus
communis}; contains Pfam profile PF00365:
Phosphofructokinase
Length = 566
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 187 KIETKSQAGDVKGKYGYKDDTGNYE*LSTVPTNTDSS 297
++E + QAG KG++ + YE +PTN D++
Sbjct: 417 ELEKRKQAGAYKGQFMGQSHFFGYEGRCGLPTNFDAT 453
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.130 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,839,955
Number of Sequences: 28952
Number of extensions: 152514
Number of successful extensions: 320
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -