Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0800
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 64  LLRNYQDFFYLCKQGTVYT*LHPMSNFRVA 153
           L ++  D+FY     T YT L   S FR+A
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFRIA 77


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 64  LLRNYQDFFYLCKQGTVYT*LHPMSNFRVA 153
           L ++  D+FY     T YT L   S FR+A
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFRIA 77


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 454 PTKAITDPLPSPTKIAQQENYY 519
           PT A  D  P P  + + +N+Y
Sbjct: 29  PTSANPDEEPDPELLDRYDNFY 50


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 454 PTKAITDPLPSPTKIAQQENYY 519
           PT A  D  P P  + + +N+Y
Sbjct: 29  PTSANPDEEPDPELLDRYDNFY 50


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 378 YLNAALNMPATNTPGKPGISP 440
           +++A +N P+ +    P ISP
Sbjct: 186 FISALVNAPSVSPASLPSISP 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,038
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)