Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0800
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   6.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.2  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 403 GIFSAALR*IYHSCKNFRITSHSRFFV 323
           GIF  AL  + ++     +TSHS ++V
Sbjct: 253 GIFGMALSPVTNNLYYSPLTSHSLYYV 279


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 523 ANSNSLVVQF*LAKAKDQLLPLLVMDVLGDIPGLPGVFVAGIFSAALR 380
           +NSN  ++   + +  + +    + + L +I   P     GIF+  LR
Sbjct: 461 SNSNQFILMTTVNEGNNNMAATYMNECLLNIQKSPRTLTLGIFAEKLR 508


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 534 NALSPIVILLLCNFSWRRQRISY 466
           N L    IL +CN  WR  R++Y
Sbjct: 44  NTLISNDILPVCNGLWRWIRLTY 66


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 534 NALSPIVILLLCNFSWRRQRISY 466
           N L    IL +CN  WR  R++Y
Sbjct: 82  NTLISNDILPVCNGLWRWIRLTY 104


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 374 LPFL*KFQNNFTFTVFRSRFKKKYN 300
           L ++  F N   +TVF   F+K ++
Sbjct: 665 LGYMNSFVNPVIYTVFNPEFRKAFH 689


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,344
Number of Sequences: 438
Number of extensions: 3431
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)