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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0796
         (511 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   265   3e-72
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   143   2e-35
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   127   1e-30
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   100   1e-22
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    81   7e-17
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    80   2e-16
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    71   1e-13
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    31   0.10 
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    31   0.13 
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    30   0.23 
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    29   0.31 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    29   0.31 
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    29   0.53 
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual         27   1.6  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    26   2.9  
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual    26   3.8  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    26   3.8  
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo...    25   8.7  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  265 bits (649), Expect = 3e-72
 Identities = 118/130 (90%), Positives = 125/130 (96%)
 Frame = +3

Query: 114 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSK 293
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMG+KDSYVGDEAQSK
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61

Query: 294 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT* 473
           RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMT 
Sbjct: 62  RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121

Query: 474 IMFETFNTPA 503
           I+FETFN PA
Sbjct: 122 IIFETFNAPA 131


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  143 bits (346), Expect = 2e-35
 Identities = 64/126 (50%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    +KD +VG EAQ+ RG+L +
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71

Query: 312 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMT*IMFET 488
           + PIE GI+ NW DME+IW + + + +L   PEEHP+LLTE PL    N+EK+    +ET
Sbjct: 72  QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131

Query: 489 FNTPAM 506
            N PA+
Sbjct: 132 LNVPAL 137


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  127 bits (306), Expect = 1e-30
 Identities = 59/126 (46%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = +3

Query: 120 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGKKDSYVGDEAQSK 293
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA++ 
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61

Query: 294 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT* 473
           R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM  
Sbjct: 62  RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121

Query: 474 IMFETF 491
            MFE +
Sbjct: 122 TMFERY 127


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  100 bits (239), Expect = 1e-22
 Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
 Frame = +3

Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGKK-------- 260
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G         M  K        
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66

Query: 261 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 419
                 D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H  
Sbjct: 67  RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126

Query: 420 LLTEAPLNPKANREKMT*IMFETFN 494
           LLTE PLNP  NRE    IMFE+FN
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFN 151


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 81.4 bits (192), Expect = 7e-17
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
 Frame = +3

Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
           LV+DNGS   +AG+ G+  P+ VF ++V R R +     + +  + VG++   + G  ++
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82

Query: 312 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFET 488
            + P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT ++FE 
Sbjct: 83  ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141

Query: 489 FNTPAM 506
           +N P++
Sbjct: 142 YNAPSV 147


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 79.8 bits (188), Expect = 2e-16
 Identities = 46/129 (35%), Positives = 68/129 (52%)
 Frame = +3

Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
           +EV+A+V+D GS   + GF+G+D P+ V PS  G       + G    + Y+    +S  
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61

Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
           G + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K    
Sbjct: 62  G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120

Query: 477 MFETFNTPA 503
           MFE+   PA
Sbjct: 121 MFESLRCPA 129


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 70.5 bits (165), Expect = 1e-13
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
 Frame = +3

Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
           EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q   
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61

Query: 297 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 470
            I  + +K    +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ 
Sbjct: 62  PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121

Query: 471 *IMFETFNTPA 503
              FE  + PA
Sbjct: 122 EAAFEQLHVPA 132


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 31.1 bits (67), Expect = 0.10
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 177 GDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTLKYP 320
           G+  PRA F  ++  P H G+++ M  KD   G+E  S +G  + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 30.7 bits (66), Expect = 0.13
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
 Frame = +3

Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
           +V+DNG+   KAGFAG        P+ + R +        G +  ++G+E  +     TL
Sbjct: 8   IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57

Query: 312 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMT*IM 479
           ++   H  G + +W     +W     N   + P   ++ +LLT+      +       ++
Sbjct: 58  QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117

Query: 480 FETFNTPA 503
           FE F   A
Sbjct: 118 FEEFQFDA 125


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 29.9 bits (64), Expect = 0.23
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 285 VPHLLHKSPSFPYRPSRPDGGAFPRSRGTR 196
           +  L+ K+PS+PY  SRP   A   S  TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 29.5 bits (63), Expect = 0.31
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +3

Query: 378  FYNELRVAPEEHPVLLTE--APLNPKANREKMT*IMFETFNTP 500
            +Y  L    E+HP+LLT+  A L P+ +  ++  I  ++ NTP
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 29.5 bits (63), Expect = 0.31
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -1

Query: 274 PT*ESFFPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 113
           PT  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 28.7 bits (61), Expect = 0.53
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = +3

Query: 318 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMT*IMFE 485
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  T   FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 486 TFNTP 500
               P
Sbjct: 172 ECQVP 176


>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 127

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = -3

Query: 314 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 135
           F G   +F  CLI++IR  +SH            D  EHG   II C T L   G I+YY
Sbjct: 47  FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 253 PIPTITP*WRGLPTIEGNTARGASSPAKPAL 161
           P+PT  P    LPT   NT +    P+ PAL
Sbjct: 74  PVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1828

 Score = 25.8 bits (54), Expect = 3.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 159 TYRSHCLLPTRQLLRRTS*ISEI 91
           TYR H  +PT  LL  T  +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
           Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 25.8 bits (54), Expect = 3.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 314 FEGQDTSFALCLISYIRVLLSHTDHHA 234
           +EG+DT+      +Y+R++L  TD  A
Sbjct: 74  YEGEDTTRITRFANYLRIILPGTDQKA 100


>SPBC1683.09c |frp1||ferric-chelate reductase
           Frp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 564

 Score = 24.6 bits (51), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 237 VMVGMGKKDSYVGDEAQSKRGILTLKYPI 323
           +M+G     +Y+G  AQ KR +LT +  I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,253,343
Number of Sequences: 5004
Number of extensions: 48959
Number of successful extensions: 125
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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