Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0796
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         286   3e-79
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         286   3e-79
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         286   3e-79
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          270   1e-74
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.4  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   4.5  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   6.0  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   6.0  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   6.0  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   7.9  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   7.9  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   7.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  286 bits (702), Expect = 3e-79
 Identities = 131/133 (98%), Positives = 132/133 (99%)
 Frame = +3

Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 468 T*IMFETFNTPAM 506
           T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  286 bits (702), Expect = 3e-79
 Identities = 131/133 (98%), Positives = 132/133 (99%)
 Frame = +3

Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 468 T*IMFETFNTPAM 506
           T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  286 bits (702), Expect = 3e-79
 Identities = 131/133 (98%), Positives = 132/133 (99%)
 Frame = +3

Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 468 T*IMFETFNTPAM 506
           T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  270 bits (663), Expect = 1e-74
 Identities = 121/133 (90%), Positives = 127/133 (95%)
 Frame = +3

Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 468 T*IMFETFNTPAM 506
           T IMFETF  PA+
Sbjct: 121 TQIMFETFAAPAV 133


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 GKAPPSGRDGRYGKEGL 265
           G+  P GRDG +G  GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 102 FKMCDEEVAALVVDNGSGMC 161
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 221 PSHDRGEHGARSIISC 174
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 290 QKRYPDPQIPHRTRNRH 340
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 302 PDPQIPHRTRNRH 340
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 294 FCSVPHLLHKSPSFPYRPSRPDGGAFPRSRGT 199
           +CSVPH     P  P R  R   GA+ R  G+
Sbjct: 495 YCSVPHY---EPLDPERVYRVATGAYIRKGGS 523


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 294 FCSVPHLLHKSPSFPYRPSRPDGGAFPRSRGT 199
           +CSVPH     P   YR +    GA+ R  G+
Sbjct: 495 YCSVPHYEPLDPEHVYRVAT---GAYIRKGGS 523


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 393 AAHCRRYDAKSSPCHPS 343
           +AH RR+D  SSP  P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,885
Number of Sequences: 2352
Number of extensions: 13592
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)