Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0796
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 285 1e-77
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 285 1e-77
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 285 1e-77
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 285 1e-77
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 285 1e-77
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 285 1e-77
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 284 3e-77
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 282 9e-77
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 277 3e-75
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 246 5e-66
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 192 1e-49
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 184 4e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 178 2e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 1e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 107 5e-24
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 72 3e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 4e-06
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.091
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.12
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 3.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 3.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 3.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 3.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.5
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 285 bits (699), Expect = 1e-77
Identities = 130/133 (97%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 284 bits (696), Expect = 3e-77
Identities = 129/133 (96%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 282 bits (692), Expect = 9e-77
Identities = 127/133 (95%), Positives = 132/133 (99%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 467
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 468 T*IMFETFNTPAM 506
T IMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 277 bits (679), Expect = 3e-75
Identities = 125/131 (95%), Positives = 130/131 (99%)
Frame = +3
Query: 114 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSK 293
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 294 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT* 473
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 474 IMFETFNTPAM 506
IMFETFNTPAM
Sbjct: 122 IMFETFNTPAM 132
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 246 bits (603), Expect = 5e-66
Identities = 112/115 (97%), Positives = 114/115 (99%)
Frame = +3
Query: 162 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTLKYPIEHGIVT 341
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 342 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFETFNTPAM 506
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAM
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 119
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 192 bits (468), Expect = 1e-49
Identities = 87/89 (97%), Positives = 88/89 (98%)
Frame = +3
Query: 240 MVGMGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 419
MVGMG+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 420 LLTEAPLNPKANREKMT*IMFETFNTPAM 506
LLTEAPLNPKANREKMT IMFETFNTPAM
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAM 89
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 185 bits (450), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKI 365
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 185 bits (450), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKI 365
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 184 bits (447), Expect = 4e-47
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDMEKI 365
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 178 bits (433), Expect = 2e-45
Identities = 80/83 (96%), Positives = 83/83 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQ 287
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG+KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 288 SKRGILTLKYPIEHGIVTNWDDM 356
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 159 bits (386), Expect = 1e-39
Identities = 69/126 (54%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 312 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFET 488
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 489 FNTPAM 506
FN PA+
Sbjct: 131 FNVPAL 136
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 122 bits (294), Expect = 2e-28
Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VG-MGKKDSYVGDEAQSKRGIL 305
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 306 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT*IMF 482
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 483 ETF 491
E +
Sbjct: 129 EQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 107 bits (257), Expect = 5e-24
Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 251
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 252 GKKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 428
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 429 EAPLNPKANREKMT*IMFETFNTPAM 506
E PLN NRE IMFE+FN P +
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGL 146
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 71.7 bits (168), Expect = 3e-13
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEA--QS 290
+EV+ LV D GS + GFAG++ P+ PS + ++ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 291 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 425
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 426 TEAPLNPKANREKMT*IMFETFNTPA 503
+E+ N +A REK+T IMFE F PA
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPA 154
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 48.0 bits (109), Expect = 4e-06
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +3
Query: 123 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGI 302
+ ++ DNG K G ++PR V SIV + +H+ KK +V E +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDK 54
Query: 303 LTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
+L Y PIE G V NWD ++IW TF + V + LT+ A + + I
Sbjct: 55 FSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 477 MFETF 491
+F+ F
Sbjct: 114 LFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 48.0 bits (109), Expect = 4e-06
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +3
Query: 123 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGI 302
+ ++ DNG K G ++PR V SIV + +H+ KK +V E +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDK 54
Query: 303 LTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
+L Y PIE G V NWD ++IW TF + V + LT+ A + + I
Sbjct: 55 FSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 477 MFETF 491
+F+ F
Sbjct: 114 LFDYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.091
Identities = 28/83 (33%), Positives = 32/83 (38%)
Frame = +2
Query: 203 PLDRGKAPPSGRDGRYGKEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 382
P G A P+G DG G G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 383 Q*AACRPRGTPSPAH*GSPQPQG 451
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.12
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 436 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 257
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 256 FPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 113
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 294 FCSVPHLLHKSPSFPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 139
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 294 FCSVPHLLHKSPSFPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 139
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDLDHVRNIQ 493
AC GT SPA GSP PQ D + + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 187 ASSPAKPALHIPEPLSTTNAATSS 116
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDLDHVRNIQ 493
AC GT SPA GSP PQ D + + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 187 ASSPAKPALHIPEPLSTTNAATSS 116
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDLDHVRNIQ 493
AC GT SPA GSP PQ D + + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 187 ASSPAKPALHIPEPLSTTNAATSS 116
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDLDHVRNIQ 493
AC GT SPA GSP PQ D + + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 187 ASSPAKPALHIPEPLSTTNAATSS 116
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 162 KAGFAGDDAPRAVFPSIVGRPRHQG 236
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 347 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 237
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 212 RGKAPPSGRDGRYGKEG 262
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,026,882
Number of Sequences: 27780
Number of extensions: 303820
Number of successful extensions: 1050
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -