Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0796
(511 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 260 4e-70
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 260 5e-70
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 260 5e-70
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 258 2e-69
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 257 3e-69
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 257 3e-69
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 253 4e-68
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 253 4e-68
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 253 4e-68
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 237 3e-63
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 190 6e-49
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 158 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 134 3e-32
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 109 1e-24
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 105 1e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 99 9e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 71 3e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 64 5e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 1e-09
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.064
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.8
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 28 3.2
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.2
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 4.2
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 5.5
At5g07000.1 68418.m00793 sulfotransferase family protein similar... 27 5.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.5
At3g26350.1 68416.m03287 expressed protein ; expression support... 27 5.5
At3g05750.1 68416.m00646 expressed protein 27 5.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 260 bits (637), Expect = 4e-70
Identities = 118/130 (90%), Positives = 124/130 (95%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 260 bits (636), Expect = 5e-70
Identities = 118/130 (90%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 260 bits (636), Expect = 5e-70
Identities = 118/130 (90%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 258 bits (632), Expect = 2e-69
Identities = 117/130 (90%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN PAM
Sbjct: 125 MFETFNVPAM 134
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 257 bits (630), Expect = 3e-69
Identities = 116/130 (89%), Positives = 122/130 (93%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN PAM
Sbjct: 125 MFETFNAPAM 134
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 257 bits (630), Expect = 3e-69
Identities = 116/130 (89%), Positives = 122/130 (93%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN PAM
Sbjct: 125 MFETFNAPAM 134
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 253 bits (620), Expect = 4e-68
Identities = 111/130 (85%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM +KD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 253 bits (620), Expect = 4e-68
Identities = 111/130 (85%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM +KD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 253 bits (620), Expect = 4e-68
Identities = 111/130 (85%), Positives = 123/130 (94%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM +KD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 477 MFETFNTPAM 506
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 237 bits (580), Expect = 3e-63
Identities = 103/130 (79%), Positives = 120/130 (92%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKR 296
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 297 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*I 476
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT I
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 477 MFETFNTPAM 506
MFE+F P+M
Sbjct: 126 MFESFAFPSM 135
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 190 bits (462), Expect = 6e-49
Identities = 87/125 (69%), Positives = 100/125 (80%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 312 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFETF 491
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMT IMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 492 NTPAM 506
+ PAM
Sbjct: 119 DVPAM 123
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 158 bits (383), Expect = 2e-39
Identities = 68/89 (76%), Positives = 81/89 (91%)
Frame = +3
Query: 240 MVGMGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 419
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 420 LLTEAPLNPKANREKMT*IMFETFNTPAM 506
LLTEAPLNPKA+REKMT IMFETF P+M
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSM 89
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 134 bits (324), Expect = 3e-32
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGKKDSYVGDEAQSKRGIL 305
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 306 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFE 485
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 486 TFN 494
+N
Sbjct: 127 KYN 129
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 109 bits (261), Expect = 1e-24
Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 22/152 (14%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGKKDS-- 266
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 267 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 410
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 411 HPVLLTEAPLNPKANREKMT*IMFETFNTPAM 506
HP+LL E PLN + REK +MFE + PA+
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPAL 156
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 105 bits (253), Expect = 1e-23
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 251
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 252 GKKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 428
GK+ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 429 EAPLNPKANREK 464
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 99 bits (238), Expect = 9e-22
Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 21/147 (14%)
Frame = +3
Query: 129 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 254
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 255 KKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 425
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 426 TEAPLNPKANREKMT*IMFETFNTPAM 506
TE+PL P +RE I+FETFN P +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGL 151
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 71.3 bits (167), Expect = 3e-13
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 312 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMT* 473
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 474 IMFETFNTPAM 506
++FET+ PA+
Sbjct: 138 LLFETYGVPAV 148
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 64.1 bits (149), Expect = 5e-11
Identities = 37/120 (30%), Positives = 60/120 (50%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGILTL 311
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 312 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT*IMFETF 491
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 59.3 bits (137), Expect = 1e-09
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = +3
Query: 129 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGKKDSYVGDEAQSKRGIL 305
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 306 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMT*IMF 482
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 483 ETFN 494
ETFN
Sbjct: 113 ETFN 116
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.064
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 253 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 116
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 455
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 456 REK 464
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 455
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 456 REK 464
REK
Sbjct: 225 REK 227
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 425 H*GSPQPQGQQREDDLDHVRN 487
H GSP+ +G + EDD+D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 364 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 275
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 356 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 249
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 415 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESFF 254
GC G T++ L C+ +S+ + TIP + Y + PL LC T + ++
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKYW 507
>At5g07000.1 68418.m00793 sulfotransferase family protein similar to
steroid sulfotransferase 3 [Brassica napus] GI:3420008,
steroid sulfotransferase 1 [Brassica napus] GI:3420004;
contains Pfam profile PF00685: Sulfotransferase domain
Length = 347
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 3 GRRGNRYLFLTVSSHCRAFNFHLVTPTSY*FH*FKMCDEEVAALVVDNGSGMCKA 167
GRR NRYL+L C+A + TS+ H + D+ V A + +G+ KA
Sbjct: 44 GRR-NRYLYLFQGFRCQAKEIQAI--TSFQKHFQSLPDDVVLATIPKSGTTWLKA 95
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 229 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 107
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g26350.1 68416.m03287 expressed protein ; expression supported
by MPSS
Length = 356
Score = 27.5 bits (58), Expect = 5.5
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +2
Query: 200 VPLDRGKAPPSGRDGRYGKEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYL 379
VPL + P + K LL +Q+R P PQ P R G +G L +
Sbjct: 87 VPLSPEERLPPRKTQNSSKRPLLLSPEDNQQQRPPPPQAPQRNG-----GGYGSTLPP-I 140
Query: 380 LQ*AACRPRGTPSPAH*GSPQPQGQQRE 463
+ + R TPSP H P+ RE
Sbjct: 141 PKPSPWRTAPTPSPHHRRGPRLPPPSRE 168
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGKKDSYVGDEAQSK 293
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 294 RG--ILTLKYPIEHGIVTNWDDMEK 362
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,464,483
Number of Sequences: 28952
Number of extensions: 288324
Number of successful extensions: 770
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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