Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0795
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   1.8  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   1.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   7.1  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.1  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 195 KAPPSGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDD 329
           K  P G  G  G + +L   E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 195 KAPPSGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDD 329
           K  P G  G  G + +L   E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 366  LRVAPEEHPVLLTEAPLNPKANREKM 443
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 530 WYDRTRTGEHGLDGDVHGGR 471
           W+D+ R+G+  L  +   GR
Sbjct: 46  WFDKFRSGDFSLKDEKRSGR 65


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 559 CLPHPCPSTEGYAL 600
           C+  PC S E YA+
Sbjct: 113 CMCRPCTSVEEYAI 126


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 130 GMCKAGFAGD 159
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,721
Number of Sequences: 438
Number of extensions: 4616
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)