Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0794
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 33 0.23
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 30 1.2
SB_49005| Best HMM Match : Lectin_C (HMM E-Value=8.6e-06) 30 1.2
SB_48091| Best HMM Match : Coronavirus_5 (HMM E-Value=7.4) 29 2.2
SB_3902| Best HMM Match : Coronavirus_5 (HMM E-Value=9.7) 29 2.2
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8) 29 3.8
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23) 29 3.8
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4) 29 3.8
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 29 3.8
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 28 5.0
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 28 5.0
SB_42857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_36955| Best HMM Match : LISCH7 (HMM E-Value=9.8) 28 6.6
SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 27 8.7
SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 327 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
+Q Q QQ+ + FQRQ+Q + Q + Q L Q P+Q
Sbjct: 271 QQRHLQQQQQRQQQFQRQQQQQQMQQRQQLQQLQQQQQPQQ 311
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/43 (20%), Positives = 26/43 (60%)
Frame = +3
Query: 258 PINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQ 386
P+ G+++ PY T +++ + +++ + ++QE + +Q+Q
Sbjct: 759 PMPGKKSNRPYTTFELEQIRQHMLRGGMAVEQERFEVIDKQRQ 801
>SB_49005| Best HMM Match : Lectin_C (HMM E-Value=8.6e-06)
Length = 451
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 285 PYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQA 404
P F +++L L N YQ+ + ++ F +QK E A+A
Sbjct: 83 PKFDKRLRDLLTTLDDNWYQLGSKKFKAFSKQKTWEKARA 122
>SB_48091| Best HMM Match : Coronavirus_5 (HMM E-Value=7.4)
Length = 141
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q L Q +Q
Sbjct: 77 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQPQQQQLQQQQLQQQ 123
>SB_3902| Best HMM Match : Coronavirus_5 (HMM E-Value=9.7)
Length = 109
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q L Q +Q
Sbjct: 45 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQPQQQQLQQQQLQQQ 91
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 210 SPRSTYSGAAANIPDSPINGQENQGPYFTSDIKN--LDENLKQNQYQ--IQQENYRTFQR 377
S +T++ A + QE Q K L E L Q+ Q +QQ+ + ++
Sbjct: 518 SKTTTFANTATTTRATTTQQQEQQQQIMQKQQKQGKLQEQLGQHLTQGPLQQQQQQLPRQ 577
Query: 378 QKQLEAAQAKNQANNLPAPQAPRQ 449
QKQ + Q + A PQ P+Q
Sbjct: 578 QKQQQPLQQQQSAPETRPPQQPQQ 601
>SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8)
Length = 235
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q P Q P+Q
Sbjct: 154 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQ----PQQQQPQQ 196
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q P Q P+Q
Sbjct: 46 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQ----PQQQQPQQ 88
>SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23)
Length = 1531
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 207 VSPRSTYSG-AAANIPDSPINGQENQGPY----FTSDIKNLDENLKQNQYQIQQENYRTF 371
V+ T++G +A N+ + N Y F IKN D + QY+I+ EN TF
Sbjct: 906 VATSKTHTGWSADNVKNRNPNNPSLNADYSIMAFADSIKNFDTSQDYFQYKIEAENKNTF 965
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q P Q P+Q
Sbjct: 45 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQ----PQQQQPQQ 87
>SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4)
Length = 167
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
N+ + ++Q Q Q+QQ+N Q Q + Q + Q P Q P+Q
Sbjct: 86 NMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQ----PQQQQPQQ 128
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 327 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAP 443
+Q Q Q QQ+ + Q+Q+Q + Q + Q P+ +AP
Sbjct: 414 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEKQPSEKAP 452
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = +1
Query: 28 AEAPAPYAPSGWKPEGPAFVXXXXXXXXXXXXXNYLPPFDPRNPAIPVIPSNEYGIHNDV 207
++ AP P+G P GP+ P DP P+ P +PS+ G +D
Sbjct: 77 SDPTAPSDPTG--PTGPSDPTLSSDPTGPSDPTGPTAPSDPTGPSDPTVPSDPTG-QSDP 133
Query: 208 SVQGLPTQEQQP 243
+ PT P
Sbjct: 134 TAPSDPTAPSDP 145
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 309 NLDENLKQNQYQIQQENYRTFQ---RQKQLEAAQAKNQANNL 425
N+++N +NQ + QENY + RQ Q K++A NL
Sbjct: 430 NMEKNKLENQCRESQENYARLEDEYRQAQASLEAQKSKARNL 471
>SB_42857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 22 VVAEAPAPYAPSGWKPEGP 78
++AE APSGWKPE P
Sbjct: 53 IMAERILERAPSGWKPEPP 71
>SB_36955| Best HMM Match : LISCH7 (HMM E-Value=9.8)
Length = 160
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 306 KNLDENLKQNQYQIQQENYRTFQRQKQLEAAQ 401
K L LKQ + Q ++E Y +RQK+L A +
Sbjct: 18 KELRRRLKQQERQQKREAYEAMKRQKKLMAEE 49
>SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 449 IRFKNHCATDFDHAC*EDHRAP---ATQVTEANLNEREILEDDSSPAKLQQK 595
+ K C TD+ + + P TQ+ + + ++E L DD SPAK ++K
Sbjct: 204 VNLKQECPTDYQSSKKKKPSKPPLGTTQLDQVKV-KKERLSDDDSPAKKKKK 254
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 294 TSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
++ ++NLD +L+Q + +++Q R+KQ E + KN+ L + RQ
Sbjct: 68 SASVENLDMSLQQRRDKVKQ------MREKQAEERKRKNEERRLAFEERKRQ 113
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 210 SPRSTYSGAAANIPDSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQL 389
S ST G ++ DSP + ++QG + + + E L+++ ++++ EN + L
Sbjct: 333 SVSSTDYGVQCDL-DSPRDHPDSQGSSLIAKLTDEIEALRKSLHEVEHENEELSDENRAL 391
Query: 390 EAAQAK 407
+ AK
Sbjct: 392 DEENAK 397
>SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 NGQENQGPYFTSD-IKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQA 416
NG+ + + T + L+ +KQ + Q+Q+ + +K LE AQAK A
Sbjct: 154 NGKLCENIWLTEEKFSALESQIKQLKSQVQKAKATIKKHEKDLEVAQAKFNA 205
>SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 NGQENQGPYFTSD-IKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQA 416
NG+ + + T + L+ +KQ + Q+Q+ + +K LE AQAK A
Sbjct: 154 NGKLCENIWLTEEKFSALESQIKQLKSQVQKAKATIKKHEKDLEVAQAKFNA 205
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 210 SPRSTYSGAAANIPDSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQL 389
S ST G ++ DSP + ++QG + + + E L+++ ++++ EN + L
Sbjct: 311 SVSSTDYGVQCDL-DSPRDHPDSQGSSLIAKLTDEIEALRKSLHEVEHENEELSDENRAL 369
Query: 390 EAAQAK 407
+ AK
Sbjct: 370 DEENAK 375
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,481,193
Number of Sequences: 59808
Number of extensions: 292815
Number of successful extensions: 996
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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