Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0794
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.051
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 32 0.27
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.27
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
U56964-5|AAB54032.1| 454|Caenorhabditis elegans Warthog (hedgeh... 30 1.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 29 2.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 25 3.3
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 29 3.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 25 3.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 25 3.4
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 28 4.4
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 7.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 7.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 327 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+QNQY QQ+ + Q+ +Q Q +NQ N LP PQ P+
Sbjct: 371 QQNQYNQQQQYGQQPQQPQQPHQQQYQNQNNYLPQPQQPQ 410
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 327 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+QNQY QQ+ + Q+ +Q Q +NQ N LP PQ P+
Sbjct: 373 QQNQYNQQQQYGQQPQQPQQPHQQQYQNQNNYLPQPQQPQ 412
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 285 PYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQ--ANNLPAPQAPRQF 452
P + + +N + N Q Y QQ+ + +QKQ Q + Q NN P+P A + +
Sbjct: 30 PSYPQNYQNHNYNAHQQHYHQQQQQQQHAHQQKQASQQQQQQQYPYNNYPSPNAIKAY 87
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = +3
Query: 207 VSPRSTYSGAAANIPDSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQ 386
V P T S + +P++P E + P N EN N Y QQ+ + + + +Q
Sbjct: 445 VPPEPTPSMQESPVPNAPQVKMEPEKPSPYQQQYNGMENGSGNPYAQQQQQHPMYAQYQQ 504
Query: 387 LEAAQAKNQANNLPAPQAPRQ 449
+ A++Q N PQ +Q
Sbjct: 505 QQQQHAQHQQNMSGYPQQQQQ 525
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 231 GAAANIPDSPINGQENQGPYFTSDIKNLDENLKQNQYQI-QQENYRTFQRQKQLEAAQ 401
G+ A + + Q+N Y T+ N +N NQYQ QQ NY T Q Q +A Q
Sbjct: 64 GSTAQYNQNQMQNQQNSNQYSTTSNMNNQQN--SNQYQQGQQNNYGT---QAQYDAGQ 116
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 231 GAAANIPDSPINGQENQGPYFTSDIKNLDENLKQNQYQI-QQENYRTFQRQKQLEAAQ 401
G+ A + + Q+N Y T+ N +N NQYQ QQ NY T Q Q +A Q
Sbjct: 78 GSTAQYNQNQMQNQQNSNQYSTTSNMNNQQN--SNQYQQGQQNNYGT---QAQYDAGQ 130
>U56964-5|AAB54032.1| 454|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 2 protein.
Length = 454
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 321 NLKQNQYQIQQENYRT-FQRQKQLEAAQAKNQANNLPAPQAPR 446
N +Q Q Q+QQ+ + Q Q+Q + AQ + Q P PQ P+
Sbjct: 328 NQQQQQQQMQQQQQQQQAQPQQQQQPAQPQQQLGFAPLPQFPQ 370
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 285 PYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAP 434
PY T ++ + + +Q Q QQ+ YR Q + + A+ Q N + P
Sbjct: 3365 PYSTGQQQHQPQQSQISQQQQQQDQYRRMQAAQMQQQPTAQGQQNRMGMP 3414
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 324 LKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQ 437
L N YQI N R Q+Q+Q + + NN P PQ
Sbjct: 1371 LVPNPYQIMTNN-RNIQKQQQNQQQHQLQRPNNAPQPQ 1407
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 119 CCGCNCPRCG 90
CCGC C CG
Sbjct: 67 CCGCGCGCCG 76
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 116 CGCNCPRCGNTKAG 75
CGC C CG G
Sbjct: 70 CGCGCCGCGGGGGG 83
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 312 LDENLKQNQYQIQQENYRTFQRQKQLEAAQA 404
LD +LKQ + + +Q+N RTF +K + AA A
Sbjct: 59 LDHDLKQLETRTRQDNARTFCDKKGVTAAMA 89
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 178 SNEYGIHNDVSVQGLPTQEQQPIFQ 252
+ +YGI + Q P Q+QQP++Q
Sbjct: 2049 AQQYGIQQPIYQQAPPQQQQQPVYQ 2073
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 178 SNEYGIHNDVSVQGLPTQEQQPIFQ 252
+ +YGI + Q P Q+QQP++Q
Sbjct: 674 AQQYGIQQPIYQQAPPQQQQQPVYQ 698
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 25.0 bits (52), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 119 CCGCNCPRCG 90
CCGC C CG
Sbjct: 66 CCGCGCGCCG 75
Score = 22.2 bits (45), Expect(2) = 3.4
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 116 CGCNCPRCGNTKAG 75
CGC C CG G
Sbjct: 69 CGCGCCGCGGGGGG 82
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 25.0 bits (52), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 119 CCGCNCPRCG 90
CCGC C CG
Sbjct: 65 CCGCGCGCCG 74
Score = 22.2 bits (45), Expect(2) = 3.4
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 116 CGCNCPRCGNTKAG 75
CGC C CG G
Sbjct: 68 CGCGCCGCGGGGGG 81
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 297 SDIKNLDENLKQNQYQIQQENYRTFQRQKQLE 392
S++KN ++ LK + Q Q ENY +RQ L+
Sbjct: 746 SELKNKEQILKGRRKQEQLENYMEHRRQSNLK 777
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 327 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQ 449
+Q Q+Q QQ+NY+ F Q+Q + Q P P+Q
Sbjct: 52 QQPQFQQQQQNYQQFLAQQQYQPQFQAQQQPQQPQYFQPQQ 92
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 270 QENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAP 443
+EN ++K +E L++ Q+Q+E K++ A AKN N+ P P P
Sbjct: 41 EENDTAEKVDELKKENETLERKVEQLQKE----LSFLKEMFMAYAKNDGNDGPPPPPP 94
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +1
Query: 16 ASVVAEAPAPYAPSGWKPEGPAFVXXXXXXXXXXXXXNYLPPFD-PRNPA-IPVIPSNEY 189
ASV A P+P+ SGW P++ PP P +P+ + + + Y
Sbjct: 68 ASVPAPVPSPFYQSGWSNPIPSYASAPALPSYSTAYSMAPPPLILPSSPSYVAPVSAPSY 127
Query: 190 GIHNDVSVQG 219
+ +S+ G
Sbjct: 128 SLTPSISIPG 137
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 330 QNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+++YQ +++ +T Q + + A+ + PAPQA +
Sbjct: 484 EDEYQKEEQKSQTLQAETKKRVARRSKSKSKSPAPQAKK 522
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 330 QNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+++YQ +++ +T Q + + A+ + PAPQA +
Sbjct: 484 EDEYQKEEQKSQTLQAETKKRVARRSKSKSKSPAPQAKK 522
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 330 QNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+++YQ +++ +T Q + + A+ + PAPQA +
Sbjct: 484 EDEYQKEEQKSQTLQAETKKRVARRSKSKSKSPAPQAKK 522
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 330 QNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPR 446
+++YQ +++ +T Q + + A+ + PAPQA +
Sbjct: 484 EDEYQKEEQKSQTLQAETKKRVARRSKSKSKSPAPQAKK 522
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,970,210
Number of Sequences: 27780
Number of extensions: 224599
Number of successful extensions: 926
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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