Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0794
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   4.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   4.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   4.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   9.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.2  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   9.2  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 62  GNLKAQPSCCRNEDSC 109
           G  K   +CCR  D C
Sbjct: 50  GRFKHTDACCRTHDMC 65


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 62  GNLKAQPSCCRNEDSC 109
           G  K   +CCR  D C
Sbjct: 55  GRFKHTDACCRTHDMC 70


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 62  GNLKAQPSCCRNEDSC 109
           G  K   +CCR  D C
Sbjct: 55  GRFKHTDACCRTHDMC 70


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 504 WSSQQAWSKSVAQWFLKRIALG 439
           W S   W++   Q++L + A G
Sbjct: 169 WGSAWQWNEERKQYYLHQFATG 190


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 175 VLPEWLDSLGQKVADSFGF 119
           ++  WL SLG  +A  FG+
Sbjct: 172 IIAIWLFSLGWTIAPMFGW 190


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 338 VPDPTRELPHFPKA 379
           +P P R LP+FP +
Sbjct: 225 IPLPVRVLPNFPSS 238


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 175 VLPEWLDSLGQKVADSFGF 119
           ++  WL SLG  +A  FG+
Sbjct: 48  IIAIWLFSLGWTIAPMFGW 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,734
Number of Sequences: 438
Number of extensions: 3122
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)