Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0791
(455 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 38 2e-04
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 35 0.002
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 35 0.002
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 35 0.002
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 35 0.002
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 1.7
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 25 1.7
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 2.9
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 5.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 22 8.9
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 22 8.9
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 37.9 bits (84), Expect = 2e-04
Identities = 24/61 (39%), Positives = 26/61 (42%)
Frame = +1
Query: 4 WSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXXXXAHTDS 183
WS AS+ RCP+TR S ST SS R AST PV A T S
Sbjct: 26 WSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTAS 85
Query: 184 C 186
C
Sbjct: 86 C 86
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 34.7 bits (76), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK + C LQGF + H
Sbjct: 5 GAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 34.7 bits (76), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK + C LQGF + H
Sbjct: 5 GAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 34.7 bits (76), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK + C LQGF + H
Sbjct: 5 GAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 34.7 bits (76), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK + C LQGF + H
Sbjct: 5 GAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.6 bits (51), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 448 RGKWRTPV*TSCRSQRRDRSINKKGEPRAGTSTE 347
RGK R + +S QR + KGEP +GT E
Sbjct: 295 RGKRRNTIASS--DQREIAEVINKGEPESGTVEE 326
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 24.6 bits (51), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 448 RGKWRTPV*TSCRSQRRDRSINKKGEPRAGTSTE 347
RGK R + +S QR + KGEP +GT E
Sbjct: 296 RGKRRNTIASS--DQREIAEVINKGEPESGTVEE 327
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 2.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 34 CPQTRPSGVETILSTLSSARPELAS 108
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 5.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 56 GWRRFFQHFLQRDRSWQAR 112
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 22.2 bits (45), Expect = 8.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 379 KGEPRAGTSTEGVEDQESL 323
KG+P+ GT+T ++Q+ L
Sbjct: 1874 KGQPKRGTNTRKNKNQQPL 1892
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 412 RSQRRDRSINKKGEPRAG 359
RS RRD IN++ P AG
Sbjct: 227 RSPRRDPPINRQHTPCAG 244
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,441
Number of Sequences: 2352
Number of extensions: 10249
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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