Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0791
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 171 2e-43
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 171 2e-43
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 171 2e-43
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 171 2e-43
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 152 1e-37
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 151 3e-37
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 148 2e-36
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 148 2e-36
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 147 4e-36
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 147 4e-36
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 144 4e-35
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 144 4e-35
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 136 7e-33
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 136 7e-33
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 132 9e-32
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 89 2e-18
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 88 3e-18
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 88 3e-18
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 86 1e-17
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 86 1e-17
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 71 3e-13
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 71 3e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 42 2e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 42 2e-04
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 2.8
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 6.5
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 6.5
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 6.5
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 27 6.5
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 8.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.6
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 27 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 171 bits (416), Expect = 2e-43
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR
Sbjct: 26 LEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRS 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLITGKEDAANNYARGHYT+ ++
Sbjct: 86 LFHPEQLITGKEDAANNYARGHYTIGKE 113
Score = 59.3 bits (137), Expect = 1e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+DL LDRIR+LAD CTGLQGFL+FH
Sbjct: 110 IGKEIIDLTLDRIRRLADNCTGLQGFLVFH 139
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKK+KLEF+IYPAP
Sbjct: 157 LSVDYGKKAKLEFSIYPAP 175
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 171 bits (416), Expect = 2e-43
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR
Sbjct: 25 LEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRS 84
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLITGKEDAANNYARGHYT+ ++
Sbjct: 85 LFHPEQLITGKEDAANNYARGHYTIGKE 112
Score = 59.3 bits (137), Expect = 1e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+DL LDRIR+LAD CTGLQGFL+FH
Sbjct: 109 IGKEIIDLTLDRIRRLADNCTGLQGFLVFH 138
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKK+KLEF+IYPAP
Sbjct: 156 LSVDYGKKAKLEFSIYPAP 174
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 171 bits (416), Expect = 2e-43
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR
Sbjct: 26 LEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRS 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLITGKEDAANNYARGHYT+ ++
Sbjct: 86 LFHPEQLITGKEDAANNYARGHYTIGKE 113
Score = 59.3 bits (137), Expect = 1e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+DL LDRIR+LAD CTGLQGFL+FH
Sbjct: 110 IGKEIIDLTLDRIRRLADNCTGLQGFLVFH 139
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKK+KLEF+IYPAP
Sbjct: 157 LSVDYGKKAKLEFSIYPAP 175
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 171 bits (416), Expect = 2e-43
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR
Sbjct: 26 LEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRS 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLITGKEDAANNYARGHYT+ ++
Sbjct: 86 LFHPEQLITGKEDAANNYARGHYTIGKE 113
Score = 59.3 bits (137), Expect = 1e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+DL LDRIR+LAD CTGLQGFL+FH
Sbjct: 110 IGKEIIDLTLDRIRRLADNCTGLQGFLVFH 139
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKK+KLEF+IYPAP
Sbjct: 157 LSVDYGKKAKLEFSIYPAP 175
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 152 bits (369), Expect = 1e-37
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGI PDG MP D + G D S+NTFFSET +GKHVPRA+FVDLEPTV+DEVRTGTY +
Sbjct: 26 LEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAK 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANNYARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNYARGHYTIGKE 113
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/30 (60%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D+V+DR+R+L ++C LQGFLIFH
Sbjct: 110 IGKELIDVVMDRVRRLTERCQSLQGFLIFH 139
Score = 40.7 bits (91), Expect = 5e-04
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LS+DYGKK+KLEF+IYPAP
Sbjct: 157 LSIDYGKKAKLEFSIYPAP 175
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 151 bits (365), Expect = 3e-37
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG + + ++G DDSFNTFFSET AGKHVPRA+ VDLEPT +DE+RTGTY+
Sbjct: 31 LEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKT 90
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQL+TGKEDAANNYARGHYT+ ++
Sbjct: 91 LFHPEQLLTGKEDAANNYARGHYTIGKE 118
Score = 52.8 bits (121), Expect = 1e-07
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+D+V+DR+R+L + C GLQGFL+FH
Sbjct: 115 IGKEIIDVVMDRVRRLVENCRGLQGFLVFH 144
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF IYPAP
Sbjct: 162 LSVDYGKKSKLEFCIYPAP 180
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 148 bits (359), Expect = 2e-36
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++
Sbjct: 26 LEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 54.4 bits (125), Expect = 4e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D VLDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTVLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 148 bits (359), Expect = 2e-36
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++
Sbjct: 26 LEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 54.4 bits (125), Expect = 4e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D VLDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTVLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 147 bits (356), Expect = 4e-36
Identities = 64/88 (72%), Positives = 79/88 (89%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++
Sbjct: 26 LEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 54.4 bits (125), Expect = 4e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D VLDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTVLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 147 bits (356), Expect = 4e-36
Identities = 64/88 (72%), Positives = 79/88 (89%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++
Sbjct: 26 LEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 54.4 bits (125), Expect = 4e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D VLDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTVLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 144 bits (348), Expect = 4e-35
Identities = 63/88 (71%), Positives = 78/88 (88%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++
Sbjct: 26 LEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 52.8 bits (121), Expect = 1e-07
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D LDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTTLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 144 bits (348), Expect = 4e-35
Identities = 63/88 (71%), Positives = 78/88 (88%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++
Sbjct: 26 LEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKK 83
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ+ITGKEDAANNYARGHYT+ ++
Sbjct: 84 LFHPEQMITGKEDAANNYARGHYTVGKE 111
Score = 52.8 bits (121), Expect = 1e-07
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D LDRIR+LAD C+GLQGF +FH
Sbjct: 108 VGKELIDTTLDRIRRLADNCSGLQGFFVFH 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKLEF+IYPAP
Sbjct: 155 LSVDYGKKSKLEFSIYPAP 173
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 136 bits (329), Expect = 7e-33
Identities = 62/88 (70%), Positives = 70/88 (79%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR
Sbjct: 32 LEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 91
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQL++GKEDAAN YARG YT+ R+
Sbjct: 92 LFHPEQLLSGKEDAANCYARGRYTIGRE 119
Score = 50.4 bits (115), Expect = 6e-07
Identities = 17/30 (56%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+G+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 116 IGREMIDVVMDRVKRLAENCNGLQGFVIFH 145
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LS +YGKK KLEFAIYPAP
Sbjct: 163 LSTEYGKKPKLEFAIYPAP 181
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 136 bits (329), Expect = 7e-33
Identities = 62/88 (70%), Positives = 70/88 (79%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR
Sbjct: 4 LEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQL++GKEDAAN YARG YT+ R+
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGRE 91
Score = 50.4 bits (115), Expect = 6e-07
Identities = 17/30 (56%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+G+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 88 IGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LS +YGKK KLEFAIYPAP
Sbjct: 135 LSTEYGKKPKLEFAIYPAP 153
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 132 bits (320), Expect = 9e-32
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGI PDG T G S TFFS+TG G+HVPR++FVDLEPTVVDE+RTG Y++
Sbjct: 26 LEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKK 82
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQ++TGKEDAANNYARGHYT+ ++
Sbjct: 83 LFHPEQMLTGKEDAANNYARGHYTVGKE 110
Score = 50.8 bits (116), Expect = 5e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEI+D LDRIR+LA+ C GLQGF +FH
Sbjct: 107 VGKEIIDTTLDRIRRLANNCEGLQGFFVFH 136
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LS +YGKKSKLEF+IYPAP
Sbjct: 154 LSAEYGKKSKLEFSIYPAP 172
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 111 bits (267), Expect = 2e-25
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
+EHG+ G + ++ S FFSE+ GKHVPRA++VDLEPTV+DE+R G Y
Sbjct: 30 IEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGN 88
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHP+Q+I GKEDAANNYARGHYT+ ++
Sbjct: 89 LFHPDQIINGKEDAANNYARGHYTIGKE 116
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKE++D+VLDRIRK + C GLQGFL+FH
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFH 142
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSV++GKKSKLEF++YPAP
Sbjct: 160 LSVEFGKKSKLEFSVYPAP 178
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 88.6 bits (210), Expect = 2e-18
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGIQPDG + + + N +++E GK+VPRAV VDLEP +D VR+G + QL
Sbjct: 27 EHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 34.7 bits (76), Expect = 0.032
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK A+ C LQGF + H
Sbjct: 109 GAELVDNVLDVVRKEAEGCDCLQGFQLTH 137
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 87.8 bits (208), Expect = 3e-18
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI P GQ D + + N +++E G+ K+VPRAV VDLEP +D VR+G + QL
Sbjct: 27 EHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYT 107
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK A+ LQGF + H
Sbjct: 109 GAELVDNVLDVVRKEAESTDCLQGFQLTH 137
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 87.8 bits (208), Expect = 3e-18
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI P GQ D + + N +++E G+ K+VPRAV VDLEP +D VR+G + QL
Sbjct: 27 EHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYT 107
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK A+ LQGF + H
Sbjct: 109 GAELVDNVLDVVRKEAESTDCLQGFQLTH 137
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGIQPDG + + + + +++E GK+VPRAV VDLEP +D VR+G + QL
Sbjct: 27 EHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.1 bits (77), Expect = 0.024
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD IRK A+ C LQGF + H
Sbjct: 109 GAELVDNVLDVIRKEAEGCDCLQGFQLTH 137
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGIQPDG + + + + +++E GK+VPRAV VDLEP +D VR+G + QL
Sbjct: 27 EHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.1 bits (77), Expect = 0.024
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD IRK A+ C LQGF + H
Sbjct: 109 GAELVDNVLDVIRKEAEGCDCLQGFQLTH 137
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 82.6 bits (195), Expect = 1e-16
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI P G D + + N +++E GK+VPRA VDLEP +D VR G + QL
Sbjct: 27 EHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQL 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.1 bits (77), Expect = 0.024
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E+VD VLD +RK A+ C LQGF + H
Sbjct: 109 GAELVDNVLDVVRKEAESCDCLQGFQMTH 137
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 71.3 bits (167), Expect = 3e-13
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHG+Q DG D G + +++ E K+VPRA+ VDL+P ++ VR+ Y +L
Sbjct: 27 EHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKL 84
Query: 186 FHPEQLITGKEDAANNYARGHY 251
F PE ++G+ A NN++RG+Y
Sbjct: 85 FDPENAVSGESGAGNNWSRGYY 106
Score = 30.3 bits (65), Expect = 0.69
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G EIVD VL IR+ A+ L+GF + H
Sbjct: 109 GAEIVDKVLSVIRREAEAADSLEGFQLIH 137
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 71.3 bits (167), Expect = 3e-13
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHG+Q DG D G + +++ E K+VPRA+ VDL+P ++ VR+ Y +L
Sbjct: 27 EHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKL 84
Query: 186 FHPEQLITGKEDAANNYARGHY 251
F PE ++G+ A NN++RG+Y
Sbjct: 85 FDPENAVSGESGAGNNWSRGYY 106
Score = 30.3 bits (65), Expect = 0.69
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G EIVD VL IR+ A+ L+GF + H
Sbjct: 109 GAEIVDKVLSVIRREAEAADSLEGFQLIH 137
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQ 182
EHGI GQ + + +D + F + +VPRAV VDLEP V++ +++ +
Sbjct: 30 EHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSN 86
Query: 183 LFHPEQLITGKE--DAANNYARGH 248
LF+ + + A NN+A G+
Sbjct: 87 LFNTDNIFMSDHGGGAGNNWASGY 110
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQ 182
EHGI GQ + + +D + F + +VPRAV VDLEP V++ +++ +
Sbjct: 30 EHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSN 86
Query: 183 LFHPEQLITGKE--DAANNYARGH 248
LF+ + + A NN+A G+
Sbjct: 87 LFNTDNIFMSDHGGGAGNNWASGY 110
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 218 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 123
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 78 TFFSETGAGKHVPRAVFVDLEPTVVD 155
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 78 TFFSETGAGKHVPRAVFVDLEPTVVD 155
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 78 TFFSETGAGKHVPRAVFVDLEPTVVD 155
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -2
Query: 454 EARGKWRTPV*TSCRSQRRDRSINKKGEPRAGTSTE------GVEDQESLQTGTLVSELA 293
E GK+ +++ +S KG+P GTSTE ED + + ++ E
Sbjct: 74 EKSGKFAGKTGKKLEMKKKLKSKKVKGDPVKGTSTEYDQLANSDEDNDVMDVSDMLPEPE 133
Query: 292 DSVQNQI 272
D V+++I
Sbjct: 134 DEVESEI 140
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 140
L H Q D +P + +GGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 27 GQMPTDKTIGGGDDSFNTFFSE-TGAGKHVPRAVFVDLEPTVVDEVRTGT 173
GQMPTDK + S NT +S+ T A + + + P+ V V T
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTAPQACDKTIIQSDCPSTVAPVTCST 205
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 288 ESASSLTSVPVCKDS*SSTPSVEVPALGSPFLL 386
ES+SS TS VC D S SVE P L +L+
Sbjct: 56 ESSSSSTSHRVCTDEEPSFLSVEEPKLEPSWLM 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,033,926
Number of Sequences: 27780
Number of extensions: 221474
Number of successful extensions: 585
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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