Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0791
(455 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 180 3e-46
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 180 3e-46
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 179 7e-46
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 179 7e-46
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 167 4e-42
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 167 4e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 161 2e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 84 5e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 82 2e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 82 2e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 81 3e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 81 3e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 81 3e-16
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 80 8e-16
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 79 1e-15
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 78 2e-15
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 2e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 61 3e-10
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 0.85
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 1.1
At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P4... 27 4.5
At3g09830.2 68416.m01173 protein kinase, putative similar to pro... 27 4.5
At3g09830.1 68416.m01172 protein kinase, putative similar to pro... 27 4.5
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 4.5
At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein si... 27 6.0
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 27 6.0
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 6.0
At5g56020.1 68418.m06990 expressed protein 27 7.9
At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N domain-... 27 7.9
At1g28470.1 68414.m03501 no apical meristem (NAM) family protein... 27 7.9
At1g27320.1 68414.m03328 histidine kinase (AHK3) identical to hi... 27 7.9
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 7.9
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 7.9
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 180 bits (439), Expect = 3e-46
Identities = 78/88 (88%), Positives = 87/88 (98%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTIGKE 113
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F +YP+P
Sbjct: 157 LSVDYGKKSKLGFTVYPSP 175
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 180 bits (439), Expect = 3e-46
Identities = 78/88 (88%), Positives = 87/88 (98%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTIGKE 113
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F +YP+P
Sbjct: 157 LSVDYGKKSKLGFTVYPSP 175
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 179 bits (436), Expect = 7e-46
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTIGKE 113
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F +YP+P
Sbjct: 157 LSVDYGKKSKLGFTVYPSP 175
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 179 bits (436), Expect = 7e-46
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTIGKE 113
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F +YP+P
Sbjct: 157 LSVDYGKKSKLGFTVYPSP 175
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 167 bits (405), Expect = 4e-42
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTVGKE 113
Score = 56.8 bits (131), Expect = 6e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 110 VGKEIVDLCLDRVRKLADNCTGLQGFLVFN 139
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F IYP+P
Sbjct: 157 LSVDYGKKSKLGFTIYPSP 175
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 167 bits (405), Expect = 4e-42
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ ++
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTVGKE 113
Score = 56.8 bits (131), Expect = 6e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 110 VGKEIVDLCLDRVRKLADNCTGLQGFLVFN 139
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVDYGKKSKL F IYP+P
Sbjct: 157 LSVDYGKKSKLGFTIYPSP 175
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 161 bits (392), Expect = 2e-40
Identities = 70/88 (79%), Positives = 81/88 (92%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF+DLEPTV+DEVRTGTYRQ
Sbjct: 26 LEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQ 85
Query: 183 LFHPEQLITGKEDAANNYARGHYTLERK 266
LFHPEQLI+GKEDAANN+ARGHYT+ R+
Sbjct: 86 LFHPEQLISGKEDAANNFARGHYTVGRE 113
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 254 LGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
+G+EIVD L+R+RKLAD CTGLQGFL+F+
Sbjct: 110 VGREIVDTCLERLRKLADNCTGLQGFLVFN 139
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 397 LSVDYGKKSKLEFAIYPAP 453
LSVD+GKKSKL F IYP+P
Sbjct: 157 LSVDFGKKSKLGFTIYPSP 175
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 176
EHGI P G+ +G D + N +++E G++VPRA+ +DLEP +D VRTG Y
Sbjct: 27 EHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPY 81
Query: 177 RQLFHPEQLITGKEDAANNYARGHYT 254
Q+F P+ + G+ A NN+A+GHYT
Sbjct: 82 GQIFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDAVLDVVRKEAENCDCLQGFQVCH 137
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGI G+ D + + N +++E G++VPRAV +DLEP +D VR+G Y Q
Sbjct: 26 LEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQ 83
Query: 183 LFHPEQLITGKEDAANNYARGHYT 254
+F P+ + G+ A NN+A+GHYT
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHG+ P G+ D + N +++E G++VPRAV +DLEP +D +R+G Y Q+
Sbjct: 27 EHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQI 85
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 86 FRPDNFVFGQSGAGNNWAKGHYT 108
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 110 GAELIDAVLDVVRKEAENCDCLQGFQVCH 138
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI GQ D + + N +F+E GK+VPRAV +DLEP +D +R+G + Q+
Sbjct: 27 EHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQI 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.0 bits (191), Expect = 3e-16
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI P G+ D + + N +++E G+ VPRAV +DLEP +D +R+G Y Q
Sbjct: 27 EHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQT 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.0 bits (191), Expect = 3e-16
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI P G+ D + + N +++E G+ VPRAV +DLEP +D +R+G Y Q
Sbjct: 27 EHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQT 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 79.8 bits (188), Expect = 8e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI GQ D + + + +F+E GK+VPRAV +DLEP +D +R+G + Q+
Sbjct: 27 EHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQI 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENSDCLQGFQVCH 137
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI G+ D T + N +++E G++VPRAV +DLEP +D +R+G + Q+
Sbjct: 27 EHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQI 85
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 86 FRPDNFVFGQSGAGNNWAKGHYT 108
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 110 GAELIDAVLDVVRKEAENCDCLQGFQVCH 138
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 185
EHGI G+ + + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+
Sbjct: 27 EHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQI 84
Query: 186 FHPEQLITGKEDAANNYARGHYT 254
F P+ + G+ A NN+A+GHYT
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYT 107
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
G E++D VLD +RK A+ C LQGF + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.7 bits (143), Expect = 2e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGI DG + T GG D + FF + ++PRA+ +DLEP V++ ++ G YR
Sbjct: 27 LEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRN 84
Query: 183 LFHPEQLITGKE--DAANNYARGHY 251
L++ E + A NN+A G++
Sbjct: 85 LYNHENIFVADHGGGAGNNWASGYH 109
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 251 HLGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
H GK + + ++D I + AD L+GF++ H
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCH 139
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 182
LEHGI DG + T GG D + FF + ++PRA+ +DLEP V++ ++ G YR
Sbjct: 27 LEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRN 84
Query: 183 LFHPEQLITGKE--DAANNYARGHY 251
L++ E + A NN+A G++
Sbjct: 85 LYNHENIFLSDHGGGAGNNWASGYH 109
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 251 HLGKEIVDLVLDRIRKLADQCTGLQGFLIFH 343
H GK + + ++D I + AD L+GF++ H
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCH 139
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 0.85
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 6 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 155
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 364 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 266
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P450
77A3p, Glycine max., PIR:T05948
Length = 512
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 TGAGKHVPRAVFVDLE-PTVVDEVRTGTYRQLFHPEQLITGKEDA 224
T AG +P V V++ P + ++ R + F P++ + GKEDA
Sbjct: 392 TLAGYDIPAGVNVEVYLPGISEDPRIWNNPKKFDPDRFMLGKEDA 436
>At3g09830.2 68416.m01173 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 418
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 454 EARGKWRTPV*TSCRSQRRDRSINKKGEPRAGTSTEGVEDQESL 323
+ RG+ +TP+ S S DR IN+ G G + S+
Sbjct: 10 DKRGEQKTPISVSLTSIFSDREINRSGSEFNSRDVSGTSTESSM 53
>At3g09830.1 68416.m01172 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 418
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 454 EARGKWRTPV*TSCRSQRRDRSINKKGEPRAGTSTEGVEDQESL 323
+ RG+ +TP+ S S DR IN+ G G + S+
Sbjct: 10 DKRGEQKTPISVSLTSIFSDREINRSGSEFNSRDVSGTSTESSM 53
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 63 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 197
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
>At5g14950.1 68418.m01754 glycosyl hydrolase family 38 protein
similar to alpha-mannosidase II SP:P27046 from [Mus
musculus]
Length = 1173
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 230 QLCPWSLHLGKEIVDLVLDRIRKLADQ 310
+LCPW H + ++ V +R KL DQ
Sbjct: 368 ELCPWGKHPVETTLENVQERALKLLDQ 394
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 97 PVSLKKVLKESSPPPMVLSVGIWPSGWMP 11
PVS L +SPP +W SGW P
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAP 129
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 137 KIDEDSTGYVLASSGLAEESVERIVSTPD 51
+++ DS+GYVL G + SVE + + D
Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364
>At5g56020.1 68418.m06990 expressed protein
Length = 230
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 370 PRAGTSTEGVEDQESLQTGTLVSELAD 290
P +GTS+ G + Q+ LQTG S LAD
Sbjct: 10 PMSGTSSSGDQQQQPLQTGG-TSLLAD 35
>At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 619
Score = 26.6 bits (56), Expect = 7.9
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Frame = -1
Query: 191 MKQLSVCASADLINNSRFK-IDE-DSTGYVLAS-------SGLAEESVERIVST 57
++ LS S+ L NN RF+ IDE DSTG S SG +E+ E++ ST
Sbjct: 49 IESLSATGSSSLHNNGRFRHIDESDSTGADCDSVSNNGSWSGESEDHKEKVPST 102
>At1g28470.1 68414.m03501 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM protein GI:6066594 from [Petunia hybrida]
Length = 314
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Frame = -1
Query: 206 NKLFWMKQLSVCASAD-----LINNSRFKIDEDSTGYVLASSGLAEESV----ERIVSTP 54
+K+F+ Q C S + L+N +RF + G+ G +EE+ E +V
Sbjct: 231 SKVFYQTQPRQCGSMEPKPKNLVNLNRFSYENIQAGFGYEHGGKSEETTQVIRELVVREG 290
Query: 53 DGLVCGHLAIRLDA 12
DG C L+ DA
Sbjct: 291 DG-SCSFLSFTCDA 303
>At1g27320.1 68414.m03328 histidine kinase (AHK3) identical to
histidine kinase AHK3 [Arabidopsis thaliana]
gi|13537198|dbj|BAB40775
Length = 1036
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 252 TLERKS*IWFWTESASSLTSVP 317
TL++K+ +WFW + +SS +P
Sbjct: 54 TLKKKNKMWFWNKISSSGLKIP 75
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 164 HWHIQTVVSSRTTYYW*GR 220
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 164 HWHIQTVVSSRTTYYW*GR 220
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,641,721
Number of Sequences: 28952
Number of extensions: 214450
Number of successful extensions: 729
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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