Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0790
         (574 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z136 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q9BWG6 Cluster: Sodium channel modifier 1; n=16; Theria...    33   4.8  
UniRef50_Q7RC48 Cluster: PHD-finger, putative; n=6; Plasmodium (...    33   6.3  
UniRef50_Q7QGY6 Cluster: ENSANGP00000012762; n=1; Anopheles gamb...    32   8.3  
UniRef50_Q5UNU7 Cluster: Uncharacterized protein L682; n=1; Acan...    32   8.3  
UniRef50_Q21U27 Cluster: Probable chorismate--pyruvate lyase; n=...    32   8.3  

>UniRef50_Q4Z136 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium berghei|Rep: Putative uncharacterized protein
            - Plasmodium berghei
          Length = 949

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 24/90 (26%), Positives = 43/90 (47%)
 Frame = -3

Query: 410  LVSVIV*YPFWFPSLYENTKHVF*LDEYQHITSKQTRLTTQGAQHYAKRIRLKTIREFIF 231
            ++ V + YPF F  +YE  K++  L  Y H    +    ++  ++Y K+   +  ++   
Sbjct: 812  IMGVSISYPFVF-IIYEYIKNLC-LFSYLHCVKYKHIYVSKLLKYYQKKFINQNFQQQNN 869

Query: 230  TLNESRNYIINVKNKHSYFKKIPMFTNKLL 141
            T++  R YI N  N+   F    +  NKLL
Sbjct: 870  TMSSDRKYISNDDNEKINFDSRNILRNKLL 899


>UniRef50_Q9BWG6 Cluster: Sodium channel modifier 1; n=16;
           Theria|Rep: Sodium channel modifier 1 - Homo sapiens
           (Human)
          Length = 230

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
 Frame = +2

Query: 332 HRV-KKHV---WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NS 499
           HR  KKH+     F+ + +  K+ KQ P+ ++  RR+  T+A  P   +T   T    + 
Sbjct: 62  HRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRRE-ETKAEAPLLTQTRLITQSALHR 120

Query: 500 SFGYDSSCRRRNKPQNAYP 556
           +  Y+S CRR+ +P+   P
Sbjct: 121 APHYNSCCRRKYRPEAPGP 139


>UniRef50_Q7RC48 Cluster: PHD-finger, putative; n=6; Plasmodium
           (Vinckeia)|Rep: PHD-finger, putative - Plasmodium yoelii
           yoelii
          Length = 1167

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 335 DEYQHITSKQTRLTTQGAQHYAKRIRLKTIREFI---FTLNESRNYIINVKNKHSYFKKI 165
           DE +  T+++   T +       ++  K I +++   + LN  RNY+IN K    ++K I
Sbjct: 369 DEKKGDTAEKKGDTAEKKGDTDDQVEKKNITDYLLNKYALNCFRNYVINKKQTEFFYKNI 428

Query: 164 PMFTNKL 144
             F N L
Sbjct: 429 KSFVNSL 435


>UniRef50_Q7QGY6 Cluster: ENSANGP00000012762; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000012762 - Anopheles gambiae
            str. PEST
          Length = 1068

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = -3

Query: 365  YENTKHVF*--LDEYQHITSKQTRLTTQGAQHYAKRIRLKTIREFIFTLNESRNYIINVK 192
            Y N +H+F   L  Y+H+ SK+ RL  +  Q+Y    R +++ +      +   Y I + 
Sbjct: 977  YNNIEHIFRVVLRFYRHLRSKEWRLQEESQQYYV-HPRYRSMLDDEIDFEKLIKYTIFLG 1035

Query: 191  NK---HSYFKKIPMF 156
            NK   H Y K+I  F
Sbjct: 1036 NKMYDHGYQKEISEF 1050


>UniRef50_Q5UNU7 Cluster: Uncharacterized protein L682; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L682 - Mimivirus
          Length = 114

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 321 VLIFIELKNMFGVFIKRWKPKRISNNDRDESPVTDGN 431
           VL+ I LKN FG+  K  K  +  + + D+SP+ DG+
Sbjct: 60  VLVAIHLKNQFGLVNKDSKDPKDKSIEFDDSPIRDGS 96


>UniRef50_Q21U27 Cluster: Probable chorismate--pyruvate lyase; n=1;
           Rhodoferax ferrireducens T118|Rep: Probable
           chorismate--pyruvate lyase - Rhodoferax ferrireducens
           (strain DSM 15236 / ATCC BAA-621 / T118)
          Length = 197

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -1

Query: 424 SVTGLSSRSLFDILFGFHLFMKTPNMFFNSMNINTSL 314
           S+ GL +R L D+LFG H   +TP + F S+ + +SL
Sbjct: 95  SIRGLGTRPLADVLFGQHGIARTP-LQFASLQVASSL 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,695,082
Number of Sequences: 1657284
Number of extensions: 9957028
Number of successful extensions: 25276
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25273
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)