Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0790
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 403 ETRVLLPTAMSHQSHLTGRPGNLDKYTPKIKL 498
           E R L+     ++   + RPG   KYT +IKL
Sbjct: 269 EKRKLIHLLQEYRCIFSLRPGLTHKYTHEIKL 300


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 74  RFSKETLKNLTDYNF 30
           RFS E  KNLT Y +
Sbjct: 413 RFSDENKKNLTPYTY 427


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  FENRTFDCYRLSFKTRKSMS*RHIRKSSLLVNIGI 168
           F N+T+D + +SF+    +  +H+   +  V +G+
Sbjct: 571 FANKTYDFHNMSFENDFIIQPKHLLSIARQVALGM 605


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 279 ALRETHSIKNHTRVYFHT 226
           A +  HS+K H R Y HT
Sbjct: 295 ATKYCHSLKIHLRRYGHT 312


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 163 QCLPTNCFCGYDVT 122
           QC+  +CFC  D T
Sbjct: 159 QCVLPDCFCSADGT 172


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 163 QCLPTNCFCGYDVT 122
           QC+  +CFC  D T
Sbjct: 166 QCVLPDCFCSADGT 179


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 76  TFDCYRLSFKTRKSMS*RHIRKSSLLVNIGIF 171
           TFD    SFK  K  S  +I  S++L+   I+
Sbjct: 28  TFDINTPSFKLSKIRSFLNITASAVLLPFAIY 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,776
Number of Sequences: 336
Number of extensions: 2710
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)