Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0790
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000264-1|AAH00264.1|  230|Homo sapiens sodium channel modifier...    33   0.71 
AL592424-8|CAI16382.1|  195|Homo sapiens sodium channel modifier...    33   0.71 
AL592424-7|CAI16381.1|  230|Homo sapiens sodium channel modifier...    33   0.71 
AK056322-1|BAB71149.1|  230|Homo sapiens protein ( Homo sapiens ...    33   0.71 
BT006705-1|AAP35351.1|  347|Homo sapiens pre-B-cell leukemia tra...    32   1.6  
AL359255-3|CAI14856.1|  347|Homo sapiens pre-B-cell leukemia hom...    32   1.6  
AL357568-3|CAI14910.1|  347|Homo sapiens pre-B-cell leukemia hom...    32   1.6  

>BC000264-1|AAH00264.1|  230|Homo sapiens sodium channel modifier 1
           protein.
          Length = 230

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
 Frame = +2

Query: 332 HRV-KKHV---WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NS 499
           HR  KKH+     F+ + +  K+ KQ P+ ++  RR+  T+A  P   +T   T    + 
Sbjct: 62  HRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRRE-ETKAEAPLLTQTRLITQSALHR 120

Query: 500 SFGYDSSCRRRNKPQNAYP 556
           +  Y+S CRR+ +P+   P
Sbjct: 121 APHYNSCCRRKYRPEAPGP 139


>AL592424-8|CAI16382.1|  195|Homo sapiens sodium channel modifier 1
           protein.
          Length = 195

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
 Frame = +2

Query: 332 HRV-KKHV---WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NS 499
           HR  KKH+     F+ + +  K+ KQ P+ ++  RR+  T+A  P   +T   T    + 
Sbjct: 27  HRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRRE-ETKAEAPLLTQTRLITQSALHR 85

Query: 500 SFGYDSSCRRRNKPQNAYP 556
           +  Y+S CRR+ +P+   P
Sbjct: 86  APHYNSCCRRKYRPEAPGP 104


>AL592424-7|CAI16381.1|  230|Homo sapiens sodium channel modifier 1
           protein.
          Length = 230

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
 Frame = +2

Query: 332 HRV-KKHV---WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NS 499
           HR  KKH+     F+ + +  K+ KQ P+ ++  RR+  T+A  P   +T   T    + 
Sbjct: 62  HRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRRE-ETKAEAPLLTQTRLITQSALHR 120

Query: 500 SFGYDSSCRRRNKPQNAYP 556
           +  Y+S CRR+ +P+   P
Sbjct: 121 APHYNSCCRRKYRPEAPGP 139


>AK056322-1|BAB71149.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31760 fis, clone NT2RI2007729. ).
          Length = 230

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
 Frame = +2

Query: 332 HRV-KKHV---WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NS 499
           HR  KKH+     F+ + +  K+ KQ P+ ++  RR+  T+A  P   +T   T    + 
Sbjct: 62  HRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRRE-ETKAEAPLLTQTRLITQSALHR 120

Query: 500 SFGYDSSCRRRNKPQNAYP 556
           +  Y+S CRR+ +P+   P
Sbjct: 121 APHYNSCCRRKYRPEAPGP 139


>BT006705-1|AAP35351.1|  347|Homo sapiens pre-B-cell leukemia
           transcription factor 1 protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 353 WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NSSFGYDSSC 523
           W  +K +  KK+I +     + Y  +    AT  +A  +  N+P   NS+ GY S C
Sbjct: 283 WFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGGYPSPC 339


>AL359255-3|CAI14856.1|  347|Homo sapiens pre-B-cell leukemia
           homeobox 1 protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 353 WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NSSFGYDSSC 523
           W  +K +  KK+I +     + Y  +    AT  +A  +  N+P   NS+ GY S C
Sbjct: 283 WFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGGYPSPC 339


>AL357568-3|CAI14910.1|  347|Homo sapiens pre-B-cell leukemia
           homeobox 1 protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 353 WCFHKEMETKKDIKQ*PRRESCYRRQCPTRAT*PAARETSTNTPRR*NSSFGYDSSC 523
           W  +K +  KK+I +     + Y  +    AT  +A  +  N+P   NS+ GY S C
Sbjct: 283 WFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGGYPSPC 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,208,322
Number of Sequences: 237096
Number of extensions: 1420123
Number of successful extensions: 2402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2402
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)