BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0790 (574 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 29 1.8 U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 29 1.8 AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 29 1.8 AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 29 1.8 U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical pr... 28 4.1 U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 28 4.1 AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 27 9.5 >U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate transporter familyprotein 4, isoform b protein. Length = 883 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 443 LWWD-IAVGNRTLVSVIV*YPFWFPSLYENTKHVF*LDEYQ 324 L WD I VG TLVS ++ P+ P+ ++ H+ L EY+ Sbjct: 744 LHWDLIVVGFCTLVSSVLGLPWMCPAAVQSLAHITSLTEYK 784 >U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate transporter familyprotein 4, isoform a protein. Length = 956 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 443 LWWD-IAVGNRTLVSVIV*YPFWFPSLYENTKHVF*LDEYQ 324 L WD I VG TLVS ++ P+ P+ ++ H+ L EY+ Sbjct: 744 LHWDLIVVGFCTLVSSVLGLPWMCPAAVQSLAHITSLTEYK 784 >AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transporter ABTS-4b protein. Length = 936 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 443 LWWD-IAVGNRTLVSVIV*YPFWFPSLYENTKHVF*LDEYQ 324 L WD I VG TLVS ++ P+ P+ ++ H+ L EY+ Sbjct: 744 LHWDLIVVGFCTLVSSVLGLPWMCPAAVQSLAHITSLTEYK 784 >AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transporter ABTS-4a protein. Length = 956 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 443 LWWD-IAVGNRTLVSVIV*YPFWFPSLYENTKHVF*LDEYQ 324 L WD I VG TLVS ++ P+ P+ ++ H+ L EY+ Sbjct: 744 LHWDLIVVGFCTLVSSVLGLPWMCPAAVQSLAHITSLTEYK 784 >U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical protein M02E1.1b protein. Length = 688 Score = 28.3 bits (60), Expect = 4.1 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = -3 Query: 323 HITSKQTRLT-TQGAQHYAKRIR-------LKTIREFIFTLNESRNYIINVKNKHSYFKK 168 H+ KQ R++ Q +Y R LK +EF +RN++ N + K+ YFKK Sbjct: 345 HLVEKQKRVSWMQSRNYYRYRTHKVDFKKLLKKQKEFPKARRFTRNFLYNWEKKNRYFKK 404 >U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein M02E1.1a protein. Length = 1077 Score = 28.3 bits (60), Expect = 4.1 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = -3 Query: 323 HITSKQTRLT-TQGAQHYAKRIR-------LKTIREFIFTLNESRNYIINVKNKHSYFKK 168 H+ KQ R++ Q +Y R LK +EF +RN++ N + K+ YFKK Sbjct: 345 HLVEKQKRVSWMQSRNYYRYRTHKVDFKKLLKKQKEFPKARRFTRNFLYNWEKKNRYFKK 404 >AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical protein R52.2 protein. Length = 1019 Score = 27.1 bits (57), Expect = 9.5 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 110 RVLNDSR*QSNVRFSKETLKNLTDYNFG 27 R DSR QS R+S+E ++N + FG Sbjct: 417 RNFRDSRSQSPSRYSREPIRNSQGFTFG 444 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,554,231 Number of Sequences: 27780 Number of extensions: 252876 Number of successful extensions: 641 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 641 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1184216096 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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