Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0788
         (477 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000069EB69 Cluster: Laminin subunit alpha-3 precurso...    33   4.3  
UniRef50_Q097L1 Cluster: Protein kinase; n=3; Stigmatella aurant...    32   5.7  
UniRef50_A2XHU2 Cluster: Putative uncharacterized protein; n=2; ...    32   5.7  
UniRef50_Q5C2S0 Cluster: SJCHGC04401 protein; n=1; Schistosoma j...    32   5.7  
UniRef50_Q9A6G0 Cluster: DnaJ-related protein; n=2; Caulobacter|...    29   8.7  
UniRef50_Q7PNH6 Cluster: ENSANGP00000006666; n=1; Anopheles gamb...    31   10.0 

>UniRef50_UPI000069EB69 Cluster: Laminin subunit alpha-3 precursor
           (Epiligrin 170 kDa subunit) (E170) (Nicein subunit
           alpha).; n=3; Xenopus tropicalis|Rep: Laminin subunit
           alpha-3 precursor (Epiligrin 170 kDa subunit) (E170)
           (Nicein subunit alpha). - Xenopus tropicalis
          Length = 1700

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 241 LSEYKRILFSLVLVACAVDAAKKFEGTLRSAAEAPQEDNLAIESASAEPG 390
           L+E KR + S  LV CA+DAA  ++  + +  EA    N A ++A +  G
Sbjct: 515 LTEIKRNVSSEDLVRCAMDAASAYDSIINAVKEAEVAANKAKDAADSALG 564


>UniRef50_Q097L1 Cluster: Protein kinase; n=3; Stigmatella
           aurantiaca DW4/3-1|Rep: Protein kinase - Stigmatella
           aurantiaca DW4/3-1
          Length = 511

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +1

Query: 262 LFSLVLVACAVDAAKKFEGTLRSAAEAPQE 351
           L +LVL  CAV A ++F+G+ R AA+A +E
Sbjct: 271 LDALVLQLCAVSAMERFKGSAREAAQALEE 300


>UniRef50_A2XHU2 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 367

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -2

Query: 467 PEFKIHSFRRRWSARILIVLRCSKQPPGSAEADSIAKLSSCGASAADLKVPSNFF 303
           PEF +   R+   A   ++LR   +    A A + A  + CG   AD  +P + F
Sbjct: 147 PEFSVEEVRKLQDALARLLLRARSKNYSEAVATAAATATCCGGGGADSGLPLDMF 201


>UniRef50_Q5C2S0 Cluster: SJCHGC04401 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04401 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 147

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 232 WQHLLSDVLRYVDLAECTECTLRRSCRV-YFDRKRHVI*FKQISTRSS*TFHCSYITDGR 56
           W    S    YVD +ECT+  ++R C V +     + +   Q+S R   TF  +YI D R
Sbjct: 61  WNETTSTETCYVDESECTKSGVKRKCSVCHIICHVNCLPLVQVSCRP--TFREAYIHDYR 118

Query: 55  TVLVVTRTQQWSR 17
                T T  W R
Sbjct: 119 NERTYT-THHWVR 130


>UniRef50_Q9A6G0 Cluster: DnaJ-related protein; n=2;
           Caulobacter|Rep: DnaJ-related protein - Caulobacter
           crescentus (Caulobacter vibrioides)
          Length = 258

 Score = 29.1 bits (62), Expect(2) = 8.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 232 WQHLLSDVLRYVDLAECTEC 173
           W+++ S   R +DLA+CTEC
Sbjct: 31  WRNIASIAARRLDLADCTEC 50



 Score = 21.4 bits (43), Expect(2) = 8.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 400 ANNRPVRQKQIR*LSCPLVGPRLPIS 323
           A N  +R      LSCPL+  R P+S
Sbjct: 4   ARNEVIRSLCRAYLSCPLLVSRRPMS 29


>UniRef50_Q7PNH6 Cluster: ENSANGP00000006666; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000006666 - Anopheles gambiae
            str. PEST
          Length = 1430

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 313  EGTLRSAAEAPQEDNLAIESASAEPGG 393
            +G L SA+ +   DN AIES +AE GG
Sbjct: 1333 DGRLSSASSSSDSDNFAIESLAAESGG 1359


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,497,021
Number of Sequences: 1657284
Number of extensions: 7825467
Number of successful extensions: 16249
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16248
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)