Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0788
         (477 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003756-1|AAO41435.1|  674|Drosophila melanogaster RE71343p pro...    28   7.5  
AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p pro...    28   7.5  
AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA...    28   7.5  

>BT003756-1|AAO41435.1|  674|Drosophila melanogaster RE71343p
           protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 VSRCIPYIQRGLHNAKRQITNVATAP 240
           V  C+ +I+  L NAKR++ ++ T P
Sbjct: 434 VDMCVEHIKSPLENAKRKVDHIYTGP 459


>AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p
           protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 VSRCIPYIQRGLHNAKRQITNVATAP 240
           V  C+ +I+  L NAKR++ ++ T P
Sbjct: 434 VDMCVEHIKSPLENAKRKVDHIYTGP 459


>AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA
           protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 VSRCIPYIQRGLHNAKRQITNVATAP 240
           V  C+ +I+  L NAKR++ ++ T P
Sbjct: 434 VDMCVEHIKSPLENAKRKVDHIYTGP 459


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,980,372
Number of Sequences: 53049
Number of extensions: 382333
Number of successful extensions: 919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)