Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0787
(230 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 24 0.18
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 1.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 20 3.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 20 3.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 20 3.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 20 3.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 20 3.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 3.9
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 20 3.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 20 3.9
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 19 9.0
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 24.2 bits (50), Expect = 0.18
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 KDYNAVCTAVE-FNYLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRD 167
K+YN++C V+ FN + +L +I + + N + + + K R+
Sbjct: 224 KNYNSICELVDAFNNIYGLAMLEIIIVVITYVLNLTDLFLVYGMSKSRN 272
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.0 bits (42), Expect = 1.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 86 AFNRKSAGHSNESVAHNNY 142
+FN + GH + + +HN Y
Sbjct: 283 SFNWTANGHGHNTSSHNYY 301
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 169 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 211
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 1 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 43
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 19.8 bits (39), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 5 TXHRSGQGLQRGVHCRRVQLLGQDGSFAFNRKSAGHSNESVAH 133
T + +G+ ++ R Q L + F FNR +AH
Sbjct: 213 TVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 255
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 18.6 bits (36), Expect = 9.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 229 HNLAGLKIFEI 197
HN+AGL I+ +
Sbjct: 344 HNMAGLMIWTV 354
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,301
Number of Sequences: 336
Number of extensions: 660
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3213870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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