Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0787
         (230 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42768-1|AAC47405.1|  892|Drosophila melanogaster KEK2 precursor...    29   0.87 
DQ138836-1|ABA86442.1|  881|Drosophila melanogaster CG4977 protein.    29   0.87 
AE014134-2085|AAF53111.1|  894|Drosophila melanogaster CG4977-PA...    29   0.87 

>U42768-1|AAC47405.1|  892|Drosophila melanogaster KEK2 precursor
           protein.
          Length = 892

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 32  QRGVHCRRVQLLGQDGSFAFNRKSA 106
           Q  VH   V  LGQDGSFA++  SA
Sbjct: 627 QVDVHLNPVCFLGQDGSFAYDYSSA 651


>DQ138836-1|ABA86442.1|  881|Drosophila melanogaster CG4977 protein.
          Length = 881

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 32  QRGVHCRRVQLLGQDGSFAFNRKSA 106
           Q  VH   V  LGQDGSFA++  SA
Sbjct: 622 QVDVHLNPVCFLGQDGSFAYDYSSA 646


>AE014134-2085|AAF53111.1|  894|Drosophila melanogaster CG4977-PA
           protein.
          Length = 894

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 32  QRGVHCRRVQLLGQDGSFAFNRKSA 106
           Q  VH   V  LGQDGSFA++  SA
Sbjct: 629 QVDVHLNPVCFLGQDGSFAYDYSSA 653


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,806,435
Number of Sequences: 53049
Number of extensions: 128799
Number of successful extensions: 223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)