Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0786
         (454 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86407-1|BAA21824.1|  963|Homo sapiens ApoER2 protein.                 30   4.3  
D50678-1|BAA09328.1|  963|Homo sapiens apolipoprotein E receptor...    30   4.3  
BC051836-1|AAH51836.2|  904|Homo sapiens low density lipoprotein...    30   4.3  
AL606760-4|CAI18908.1|  963|Homo sapiens low density lipoprotein...    30   4.3  
AL606760-2|CAI18910.1|  904|Homo sapiens low density lipoprotein...    30   4.3  
AL355483-3|CAI22781.1|  963|Homo sapiens low density lipoprotein...    30   4.3  
AL355483-1|CAI22780.1|  904|Homo sapiens low density lipoprotein...    30   4.3  
DQ524158-1|ABI35670.1|  118|Homo sapiens immunoglobulin heavy ch...    29   7.4  

>D86407-1|BAA21824.1|  963|Homo sapiens ApoER2 protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>D50678-1|BAA09328.1|  963|Homo sapiens apolipoprotein E receptor 2
           precursor protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>BC051836-1|AAH51836.2|  904|Homo sapiens low density lipoprotein
           receptor-related protein 8, apolipoprotein e receptor
           protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>AL606760-4|CAI18908.1|  963|Homo sapiens low density lipoprotein
           receptor-related protein 8, apolipoprotein e receptor
           protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>AL606760-2|CAI18910.1|  904|Homo sapiens low density lipoprotein
           receptor-related protein 8, apolipoprotein e receptor
           protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>AL355483-3|CAI22781.1|  963|Homo sapiens low density lipoprotein
           receptor-related protein 8, apolipoprotein e receptor
           protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>AL355483-1|CAI22780.1|  904|Homo sapiens low density lipoprotein
           receptor-related protein 8, apolipoprotein e receptor
           protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 403 AVFSVNGE*DCGDGSDE 453
           AVF  +G+ DCGDGSDE
Sbjct: 182 AVFVCDGDDDCGDGSDE 198


>DQ524158-1|ABI35670.1|  118|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 148 WFRLVAGEGDNCLRRHSVYCLGNTNY--TLPGRFGLRYEKQDLQIGKMLRKIVSSRT 312
           W R  AG+G   + R  VY +GNTNY  +L  R  +  ++ + Q    L  + ++ T
Sbjct: 35  WIRQPAGKGLEWIGR--VYTIGNTNYNPSLQSRVTISIDRSNNQYSLNLGSVTAADT 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,899,715
Number of Sequences: 237096
Number of extensions: 1638712
Number of successful extensions: 4871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4870
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)