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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0785
         (426 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   116   2e-27
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   107   7e-25
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    66   2e-12
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...    58   4e-10
SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase |Schi...    26   2.1  
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom...    25   4.9  
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces...    24   8.6  
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa...    24   8.6  
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ...    24   8.6  
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S...    24   8.6  

>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  116 bits (279), Expect = 2e-27
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = +2

Query: 38  MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
           MRE +S+HVGQAG QIGNACWELYCLEHGIQP+G M  +      D  F+TFFSETG GK
Sbjct: 1   MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60

Query: 218 HVPRAVFVDLEPMLL 262
           +VPR+++VDLEP ++
Sbjct: 61  YVPRSIYVDLEPNVI 75



 Score = 97.5 bits (232), Expect = 8e-22
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +1

Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
           V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHYT+GKE+V  V D+I ++AD C+
Sbjct: 74  VIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCS 130


>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  107 bits (257), Expect = 7e-25
 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
 Frame = +2

Query: 38  MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHS-----FNTFFSE 202
           MRE +SVHVGQAGVQIGNACWELYCLEHGI PDG  PT+ +    ++S     F TFFSE
Sbjct: 1   MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59

Query: 203 TGAGKHVPRAVFVDLEPMLL 262
           TG GK VPR+++VDLEP ++
Sbjct: 60  TGQGKFVPRSIYVDLEPNVI 79



 Score = 95.9 bits (228), Expect = 2e-21
 Identities = 38/57 (66%), Positives = 51/57 (89%)
 Frame = +1

Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
           V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHYT+GKE++  VL+RI ++AD C+
Sbjct: 78  VIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCS 134


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 66.1 bits (154), Expect = 2e-12
 Identities = 33/95 (34%), Positives = 54/95 (56%)
 Frame = +2

Query: 41  RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
           RE +++  GQ G QIG+  W+  CLEHGI PDG + +  T  G D   + FF ++   ++
Sbjct: 3   REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT-EGVDRK-DVFFYQSDDTRY 60

Query: 221 VPRAVFVDLEPMLLMRSALAHTDSCFIQNNLLLVR 325
           +PRA+ +DLEP ++         S +   N+L+ +
Sbjct: 61  IPRAILIDLEPRVVNNILSDTYGSLYNPENILITK 95


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score = 58.4 bits (135), Expect = 4e-10
 Identities = 30/72 (41%), Positives = 37/72 (51%)
 Frame = +2

Query: 38  MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
           MRE + +  GQ G Q+G A W     EHG+   G      T        N +F+E   GK
Sbjct: 1   MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58

Query: 218 HVPRAVFVDLEP 253
           +VPRAV VDLEP
Sbjct: 59  YVPRAVLVDLEP 70



 Score = 51.6 bits (118), Expect = 5e-08
 Identities = 22/55 (40%), Positives = 35/55 (63%)
 Frame = +1

Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
           +D V++G +  LF P+ +I G+  A N +A+GHYT G E+   VLD + + A+ C
Sbjct: 73  MDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEAC 127


>SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 506

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 270 DLINNIGSRSTKTARGTCLPAPVSLKKVLKEWSPP 166
           D++    SR  +  + T LP P +    + EW PP
Sbjct: 186 DILTFNQSRYPRVHKETLLPVPHTADSAIDEWYPP 220


>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 534

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 60  TLAKPESRSVMPAGSFTAWSTASSLMARCP 149
           +L+ P SR++ P  S +  STASSL    P
Sbjct: 181 SLSPPSSRALKPIHSLSNPSTASSLEPSSP 210


>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3131

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 289  VCMCQCGPHQQHRFKIDEDSTGYV 218
            VC  + G  Q    KID + TGYV
Sbjct: 1877 VCNDRSGHRQSSVIKIDPNETGYV 1900


>SPCC576.15c |ksg1||serine/threonine protein kinase
           Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 592

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 228 RGTCLPAPVSLKKVLKEWS 172
           RGT LP   +L++  KEWS
Sbjct: 434 RGTLLPCQSNLEEENKEWS 452


>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 325

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 146 PTDKTIGGGDHSFNTFFSETGAGKH 220
           P+D T+GGG + +++  S T  G H
Sbjct: 191 PSD-TVGGGAYDYSSSGSHTHGGSH 214


>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
           Sad1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 514

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 182 KNGLHPRWSCLWASGHQ 132
           +NG HP WS L A+  Q
Sbjct: 14  QNGAHPAWSTLGANSAQ 30


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,927,153
Number of Sequences: 5004
Number of extensions: 39559
Number of successful extensions: 133
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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