Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0785
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 142 7e-35
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 142 7e-35
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 142 7e-35
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 140 3e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 130 5e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 124 4e-29
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 123 5e-29
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 123 5e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 122 1e-28
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 122 1e-28
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 122 1e-28
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 122 1e-28
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 113 5e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 111 3e-25
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 93 8e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 69 2e-12
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 69 2e-12
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 67 6e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 66 8e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 60 7e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 60 7e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 50 7e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 50 7e-07
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.15
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 2.4
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 2.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 2.4
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 2.4
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 2.4
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 2.4
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 2.4
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 2.4
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 28 3.2
Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical p... 27 5.6
Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical p... 27 5.6
U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein. 27 5.6
Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 26 9.8
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 26 9.8
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 26 9.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 142 bits (345), Expect = 7e-35
Identities = 59/75 (78%), Positives = 70/75 (93%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG D SF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAV VDLEP ++
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 107 bits (256), Expect = 4e-24
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ LDRI +LAD CT
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCT 130
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 142 bits (345), Expect = 7e-35
Identities = 59/75 (78%), Positives = 70/75 (93%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG D SF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAV VDLEP ++
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 107 bits (256), Expect = 4e-24
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ LDRI +LAD CT
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCT 130
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 142 bits (345), Expect = 7e-35
Identities = 59/75 (78%), Positives = 70/75 (93%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG D SF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAV VDLEP ++
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 107 bits (256), Expect = 4e-24
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ LDRI +LAD CT
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCT 130
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 140 bits (340), Expect = 3e-34
Identities = 58/74 (78%), Positives = 69/74 (93%)
Frame = +2
Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
RE +S+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG D SF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 221 VPRAVFVDLEPMLL 262
VPRAV VDLEP ++
Sbjct: 61 VPRAVMVDLEPTVI 74
Score = 107 bits (256), Expect = 4e-24
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ LDRI +LAD CT
Sbjct: 73 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCT 129
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 130 bits (313), Expect = 5e-31
Identities = 55/75 (73%), Positives = 64/75 (85%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRA+FVDLEP ++
Sbjct: 61 HVPRAIFVDLEPTVI 75
Score = 98.7 bits (235), Expect = 2e-21
Identities = 41/56 (73%), Positives = 51/56 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
V+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++ V+DR+ +L ++C
Sbjct: 74 VIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERC 129
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 124 bits (298), Expect = 4e-29
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = +2
Query: 35 KMRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAG 214
+ RE +S+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G D SFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 215 KHVPRAVFVDLEP 253
KHVPRA+ VDLEP
Sbjct: 65 KHVPRAIMVDLEP 77
Score = 98.3 bits (234), Expect = 2e-21
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+ V+DR+ +L + C
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENC 134
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 123 bits (297), Expect = 5e-29
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 104 bits (249), Expect = 3e-23
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLDRI +LAD C+
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCS 128
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 123 bits (297), Expect = 5e-29
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 104 bits (249), Expect = 3e-23
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLDRI +LAD C+
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCS 128
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 122 bits (294), Expect = 1e-28
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 104 bits (249), Expect = 3e-23
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLDRI +LAD C+
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCS 128
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 122 bits (294), Expect = 1e-28
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 104 bits (249), Expect = 3e-23
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLDRI +LAD C+
Sbjct: 72 VVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCS 128
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 122 bits (293), Expect = 1e-28
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 100 bits (240), Expect = 4e-22
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ LDRI +LAD C+
Sbjct: 72 VVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCS 128
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 122 bits (293), Expect = 1e-28
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 218 HVPRAVFVDLEPMLL 262
+VPR++FVDLEP ++
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 100 bits (240), Expect = 4e-22
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
VVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ LDRI +LAD C+
Sbjct: 72 VVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCS 128
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 113 bits (272), Expect = 5e-26
Identities = 49/74 (66%), Positives = 57/74 (77%)
Frame = +2
Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
RE +S+HVGQAGVQIGNACWEL+CLEHGIQPDG D T + NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 221 VPRAVFVDLEPMLL 262
VPR +FVDLEP ++
Sbjct: 68 VPRCLFVDLEPTVV 81
Score = 93.1 bits (221), Expect = 8e-20
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
VVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ V+DR+ +LA+ C
Sbjct: 80 VVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENC 135
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 111 bits (266), Expect = 3e-25
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 218 HVPRAVFVDLEPMLL 262
HVPR++FVDLEP ++
Sbjct: 58 HVPRSIFVDLEPTVV 72
Score = 98.3 bits (234), Expect = 2e-21
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
VVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+ LDRI +LA+ C
Sbjct: 71 VVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNC 126
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +2
Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 221 VPRAVFVDLEPMLL 262
VPRA++VDLEP +L
Sbjct: 65 VPRAIYVDLEPTVL 78
Score = 89.8 bits (213), Expect = 7e-19
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
V+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++ VLDRI K + C
Sbjct: 77 VLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENC 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 93.1 bits (221), Expect = 8e-20
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
VVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ V+DR+ +LA+ C
Sbjct: 52 VVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENC 107
Score = 70.9 bits (166), Expect = 3e-13
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +2
Query: 104 LYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPRAVFVDLEPMLL 262
++CLEHGIQPDG D T + NTFF+ET GKHVPR +FVDLEP ++
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVV 53
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 68.5 bits (160), Expect = 2e-12
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ EHGI P GQ D + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 56.8 bits (131), Expect = 6e-09
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD + K A+
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 68.5 bits (160), Expect = 2e-12
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ EHGI P GQ D + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 56.8 bits (131), Expect = 6e-09
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD + K A+
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + V GQ G QIG WE+ EHGIQPDG + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 60.1 bits (139), Expect = 7e-10
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD + K A+ C
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGC 127
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 66.9 bits (156), Expect = 6e-12
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD I K A+ C
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 66.5 bits (155), Expect = 8e-12
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD I K A+ C
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRA VDLEP
Sbjct: 59 YVPRACLVDLEP 70
Score = 60.5 bits (140), Expect = 5e-10
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR G + QLF P+ + G+ A NN+A+GHYT G E+V VLD + K A+ C
Sbjct: 73 MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESC 127
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 60.1 bits (139), Expect = 7e-10
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
M+E ++V VGQ G QIG WE EHG+Q DG D G +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 218 HVPRAVFVDLEP 253
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
Score = 46.4 bits (105), Expect = 9e-06
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417
++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL I + A+
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAE 125
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 60.1 bits (139), Expect = 7e-10
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
M+E ++V VGQ G QIG WE EHG+Q DG D G +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 218 HVPRAVFVDLEP 253
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
Score = 46.4 bits (105), Expect = 9e-06
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417
++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL I + A+
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAE 125
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 50.0 bits (114), Expect = 7e-07
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 50 MSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPR 229
M+VHVGQ G Q+ A W+ EHGI GQ + + + + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 230 AVFVDLEPMLL 262
AV VDLEP ++
Sbjct: 65 AVLVDLEPRVI 75
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 50.0 bits (114), Expect = 7e-07
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 50 MSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPR 229
M+VHVGQ G Q+ A W+ EHGI GQ + + + + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 230 AVFVDLEPMLL 262
AV VDLEP ++
Sbjct: 65 AVLVDLEPRVI 75
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 66 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLFSARPELAST 221
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDR 399
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 21 KKLKLKCVSACLYTLAKPESRSVM--PAGSFTAWSTASSLMARCPQTRPSGVETILSTLF 194
K KLK L+ + ++ P GSF W ++ R + ++ +L+ F
Sbjct: 390 KGFKLKLTDEILWKYVDASTAHILEIPRGSFILWQLITTCKPRLQVDKERWIQLLLNIKF 449
Query: 195 SARPEL 212
PEL
Sbjct: 450 KIIPEL 455
>Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical
protein T06E6.2b protein.
Length = 383
Score = 27.1 bits (57), Expect = 5.6
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -3
Query: 250 FKIDEDSTGYVLASSGLAEKSVERMVSTPDGLV--CGHLAIRLDAVLQAVKLPAGITDLD 77
FKID L S + + VE + V C H D L+ P I+D
Sbjct: 57 FKIDSAKRD-PLGKSRTSRRDVENLPPQKSRYVDPCPHY----DYDLEEAGNPDSISDYA 111
Query: 76 SGLANVYRHALTHFNLSFFL 17
G+ + YRH HF + +L
Sbjct: 112 QGIFDYYRHREVHFRVRKYL 131
>Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical
protein T06E6.2a protein.
Length = 384
Score = 27.1 bits (57), Expect = 5.6
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -3
Query: 250 FKIDEDSTGYVLASSGLAEKSVERMVSTPDGLV--CGHLAIRLDAVLQAVKLPAGITDLD 77
FKID L S + + VE + V C H D L+ P I+D
Sbjct: 58 FKIDSAKRD-PLGKSRTSRRDVENLPPQKSRYVDPCPHY----DYDLEEAGNPDSISDYA 112
Query: 76 SGLANVYRHALTHFNLSFFL 17
G+ + YRH HF + +L
Sbjct: 113 QGIFDYYRHREVHFRVRKYL 132
>U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein.
Length = 385
Score = 27.1 bits (57), Expect = 5.6
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -3
Query: 250 FKIDEDSTGYVLASSGLAEKSVERMVSTPDGLV--CGHLAIRLDAVLQAVKLPAGITDLD 77
FKID L S + + VE + V C H D L+ P I+D
Sbjct: 59 FKIDSAKRD-PLGKSRTSRRDVENLPPQKSRYVDPCPHY----DYDLEEAGNPDSISDYA 113
Query: 76 SGLANVYRHALTHFNLSFFL 17
G+ + YRH HF + +L
Sbjct: 114 QGIFDYYRHREVHFRVRKYL 133
>Z74042-9|CAA98526.1| 325|Caenorhabditis elegans Hypothetical
protein T11F9.10 protein.
Length = 325
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 217 ARTPCCLRRS*TYVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYY 387
+R PC L+R + VD V+ G+ P++ I + A + G + I Y
Sbjct: 251 SRVPCLLKRGSSETVDAVKFGSKNAGLTPKEKILAAQAANDAKPIGRNQLSTNICMY 307
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 113 LEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPRAVFVDLE 250
L H Q D +P + +GGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 80 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETG 208
QI +C CL +G++P G P I G FF+++G
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 101
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 80 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETG 208
QI +C CL +G++P G P I G FF+++G
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 119
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 80 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETG 208
QI +C CL +G++P G P I G FF+++G
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,021,983
Number of Sequences: 27780
Number of extensions: 242860
Number of successful extensions: 668
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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