Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0785
         (426 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   1.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   2.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 101 PSRHYRSGLR 72
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 186 LKEWSPPPMVLSVGIWPSGWMPCSR 112
           ++EW+P    + +  W   W+P  R
Sbjct: 527 VEEWNPLTDTVPIHTWIHPWLPLLR 551


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 164 RWSCLWASGHQAGCRAPGSKAPSRHYR 84
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 164 RWSCLWASGHQAGCRAPGSKAPSRHYR 84
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 164 RWSCLWASGHQAGCRAPGSKAPSRHYR 84
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 229 CCLRRS*TYVVDEVRTGTYRQLFHPEQLITGKEDAAN 339
           C  +   TYV  EV TGT  ++   ++     +D  N
Sbjct: 203 CFQQAQTTYVTKEVATGTASEITQIQEATLVYKDGTN 239


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 109 LPGARHPA*WPDAHRQDHRGWRPFFQH 189
           LP + HP     +    HRG  P  QH
Sbjct: 312 LPPSYHPHQHHPSQYHPHRGSSPHHQH 338


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = -3

Query: 397 CPKHNIRFPFQWCSDHGHSCWPH 329
           C ++   +    C D G   WPH
Sbjct: 563 CEEYEYVYDEYTCMDCGPGKWPH 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,210
Number of Sequences: 438
Number of extensions: 3192
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)