BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0785 (426 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 156 7e-39 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 156 7e-39 At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 155 2e-38 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 155 2e-38 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 137 3e-33 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 137 3e-33 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 131 2e-31 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 66 9e-12 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 66 9e-12 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 66 1e-11 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 66 1e-11 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 65 2e-11 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 64 4e-11 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 64 4e-11 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 9e-11 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 9e-11 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 62 2e-10 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 61 3e-10 At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 1.7 At2g20300.1 68415.m02371 protein kinase family protein contains ... 28 3.0 At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 4.0 At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 4.0 At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 4.0 At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 4.0 At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 27 4.0 At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /... 27 4.0 At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 5.3 At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 7.0 At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 7.0 At5g22840.1 68418.m02670 protein kinase family protein contains ... 26 9.3 At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 26 9.3 At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 26 9.3 At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 26 9.3 At1g67520.1 68414.m07692 lectin protein kinase family protein co... 26 9.3 At1g23380.2 68414.m02924 homeobox transcription factor (KNAT6) n... 26 9.3 At1g23380.1 68414.m02925 homeobox transcription factor (KNAT6) n... 26 9.3 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 156 bits (378), Expect = 7e-39 Identities = 63/75 (84%), Positives = 73/75 (97%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGD +FNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 107 bits (257), Expect = 3e-24 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 156 bits (378), Expect = 7e-39 Identities = 63/75 (84%), Positives = 73/75 (97%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGD +FNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 107 bits (257), Expect = 3e-24 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 155 bits (375), Expect = 2e-38 Identities = 63/75 (84%), Positives = 72/75 (96%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGD +FNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 107 bits (257), Expect = 3e-24 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 155 bits (375), Expect = 2e-38 Identities = 63/75 (84%), Positives = 72/75 (96%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGD +FNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 107 bits (257), Expect = 3e-24 Identities = 49/57 (85%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 137 bits (332), Expect = 3e-33 Identities = 56/75 (74%), Positives = 67/75 (89%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSETGAGK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 106 bits (255), Expect = 5e-24 Identities = 47/57 (82%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV LDR+ KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCT 130 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 137 bits (332), Expect = 3e-33 Identities = 56/75 (74%), Positives = 67/75 (89%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSETGAGK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVFVDLEP ++ Sbjct: 61 HVPRAVFVDLEPTVI 75 Score = 106 bits (255), Expect = 5e-24 Identities = 47/57 (82%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV LDR+ KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCT 130 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 131 bits (316), Expect = 2e-31 Identities = 52/75 (69%), Positives = 66/75 (88%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSET +G+ Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60 Query: 218 HVPRAVFVDLEPMLL 262 HVPRAVF+DLEP ++ Sbjct: 61 HVPRAVFLDLEPTVI 75 Score = 103 bits (246), Expect = 7e-23 Identities = 45/57 (78%), Positives = 52/57 (91%) Frame = +1 Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426 V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIV L+R+ KLAD CT Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCT 130 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 66.1 bits (154), Expect = 9e-12 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG WE+ C EHGI P G+ D + N +++E G+ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58 Query: 218 HVPRAVFVDLEP 253 VPRAV +DLEP Sbjct: 59 FVPRAVLMDLEP 70 Score = 58.8 bits (136), Expect = 1e-09 Identities = 24/55 (43%), Positives = 36/55 (65%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 66.1 bits (154), Expect = 9e-12 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG WE+ C EHGI P G+ D + N +++E G+ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58 Query: 218 HVPRAVFVDLEP 253 VPRAV +DLEP Sbjct: 59 FVPRAVLMDLEP 70 Score = 58.8 bits (136), Expect = 1e-09 Identities = 24/55 (43%), Positives = 36/55 (65%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 65.7 bits (153), Expect = 1e-11 Identities = 33/72 (45%), Positives = 41/72 (56%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG WE+ C EHGI GQ D + N +F+E GK Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58 Query: 218 HVPRAVFVDLEP 253 +VPRAV +DLEP Sbjct: 59 YVPRAVLMDLEP 70 Score = 58.4 bits (135), Expect = 2e-09 Identities = 23/55 (41%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 65.7 bits (153), Expect = 1e-11 Identities = 31/72 (43%), Positives = 43/72 (59%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+ Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLER-INVYYNEASGGR 59 Query: 218 HVPRAVFVDLEP 253 +VPRAV +DLEP Sbjct: 60 YVPRAVLMDLEP 71 Score = 60.9 bits (141), Expect = 4e-10 Identities = 24/55 (43%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 74 MDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 64.9 bits (151), Expect = 2e-11 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---HSFNTFFSETG 208 MRE + + GQ G QIG+ WE+ C EHGI P G + +G D N +++E Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55 Query: 209 AGKHVPRAVFVDLEP 253 G++VPRA+ +DLEP Sbjct: 56 CGRYVPRAILMDLEP 70 Score = 62.9 bits (146), Expect = 9e-11 Identities = 26/55 (47%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 64.1 bits (149), Expect = 4e-11 Identities = 32/72 (44%), Positives = 41/72 (56%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG WE+ C EHGI GQ D + + +F+E GK Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58 Query: 218 HVPRAVFVDLEP 253 +VPRAV +DLEP Sbjct: 59 YVPRAVLMDLEP 70 Score = 54.8 bits (126), Expect = 2e-08 Identities = 22/53 (41%), Positives = 36/53 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417 +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 64.1 bits (149), Expect = 4e-11 Identities = 31/72 (43%), Positives = 42/72 (58%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG+ WE+ C EHGI G+ D T N +++E G+ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59 Query: 218 HVPRAVFVDLEP 253 +VPRAV +DLEP Sbjct: 60 YVPRAVLMDLEP 71 Score = 59.3 bits (137), Expect = 1e-09 Identities = 23/55 (41%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 74 MDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 62.9 bits (146), Expect = 9e-11 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +2 Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220 RE +++ VGQ G QIG W+ CLEHGI DG + D GGD + FF + + Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL-EDFATQGGDRK-DVFFYQADDQHY 60 Query: 221 VPRAVFVDLEPMLL 262 +PRA+ +DLEP ++ Sbjct: 61 IPRALLIDLEPRVI 74 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 62.9 bits (146), Expect = 9e-11 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +2 Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220 RE +++ VGQ G QIG W+ CLEHGI DG + D GGD + FF + + Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL-EDFATQGGDRK-DVFFYQADDQHY 60 Query: 221 VPRAVFVDLEPMLL 262 +PRA+ +DLEP ++ Sbjct: 61 IPRALLIDLEPRVI 74 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 61.7 bits (143), Expect = 2e-10 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG+ WE+ LEHGI G+ D + N +++E G+ Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58 Query: 218 HVPRAVFVDLEP 253 +VPRAV +DLEP Sbjct: 59 YVPRAVLMDLEP 70 Score = 61.3 bits (142), Expect = 3e-10 Identities = 25/55 (45%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 61.3 bits (142), Expect = 3e-10 Identities = 25/55 (45%), Positives = 37/55 (67%) Frame = +1 Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423 +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127 Score = 60.9 bits (141), Expect = 4e-10 Identities = 29/72 (40%), Positives = 40/72 (55%) Frame = +2 Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217 MRE + + GQ G QIG WE+ C EHGI G+ + + N +++E G+ Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58 Query: 218 HVPRAVFVDLEP 253 VPRAV +DLEP Sbjct: 59 FVPRAVLMDLEP 70 >At1g52160.1 68414.m05887 metallo-beta-lactamase family protein Length = 890 Score = 28.7 bits (61), Expect = 1.7 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 74 + E G+ + SG + E + ++ D + H A DA+++ T +D Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807 Query: 73 G-LANVYRHALTHFN 32 G ANVYR LTHF+ Sbjct: 808 GSAANVYRIVLTHFS 822 >At2g20300.1 68415.m02371 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 744 Score = 27.9 bits (59), Expect = 3.0 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -3 Query: 271 GPHQQHRFKIDEDSTGYVLASSGLAEKSVERMVSTPDGLVCG 146 G H+ R+ + ++T +S + VE + STP G CG Sbjct: 75 GHHRHRRWHLRRNATAVSPSSHDCQQTCVEPLTSTPFGSPCG 116 >At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 27.5 bits (58), Expect = 4.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -3 Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89 I E S G +A+ V R V T +G + +DA++QA KLP I Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287 >At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 27.5 bits (58), Expect = 4.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -3 Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89 I E S G +A+ V R V T +G + +DA++QA KLP I Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287 >At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 27.5 bits (58), Expect = 4.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -3 Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89 I E S G +A+ V R V T +G + +DA++QA KLP I Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287 >At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829 Copine I {Homo sapiens} Length = 468 Score = 27.5 bits (58), Expect = 4.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -3 Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89 I E S G +A+ V R V T +G + +DA++QA KLP I Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287 >At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein - Hordeum vulgare, EMBL:AF109195; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 Length = 158 Score = 27.5 bits (58), Expect = 4.0 Identities = 14/42 (33%), Positives = 16/42 (38%) Frame = -1 Query: 207 PVSLKKVLKEWSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 82 PVS L SPP +W SGW P +PI Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142 >At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory / CAF identical to RNA helicase/RNAseIII CAF protein GB:AAF03534 GI:6102610 from [Arabidopsis thaliana] Length = 1909 Score = 27.5 bits (58), Expect = 4.0 Identities = 10/37 (27%), Positives = 17/37 (45%) Frame = +2 Query: 119 HGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPR 229 H +G++P D + GG+H + GK P+ Sbjct: 612 HDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPK 648 >At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to ubiquitin-specific protease 15 (UBP15) [Arabidopsis thaliana] GI:11993475; contains Pfam profiles PF00443: Ubiquitin carboxyl-terminal hydrolase, PF01753: MYND finger Length = 631 Score = 27.1 bits (57), Expect = 5.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 149 WASGHQAGCRAPGSKAPSRHYRSGLR 72 W+SGHQ CR G + ++GLR Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115 >At1g06470.2 68414.m00686 phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275 Length = 414 Score = 26.6 bits (56), Expect = 7.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 273 HWHIQTVVSSRTTYYW*GR 329 H+ IQ V+S T+YW GR Sbjct: 114 HFSIQAVLSKMITWYWSGR 132 >At1g06470.1 68414.m00685 phosphate translocator-related low similarity to SP|P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {Brassica oleracea}, phosphoenolpyruvate/phosphate translocator precursor [Mesembryanthemum crystallinum] GI:9295275 Length = 414 Score = 26.6 bits (56), Expect = 7.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 273 HWHIQTVVSSRTTYYW*GR 329 H+ IQ V+S T+YW GR Sbjct: 114 HFSIQAVLSKMITWYWSGR 132 >At5g22840.1 68418.m02670 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 538 Score = 26.2 bits (55), Expect = 9.3 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +2 Query: 137 GQMPTDKTIGGGDHSFNTFFSETGAGKHVPRAVFVDLEPMLLMRSALAHTDSCFIQN 307 G MP K GG HS FF+ G +H+ R F L +L + + D+ +Q+ Sbjct: 391 GMMPR-KIALGGRHS-RDFFNRQGELRHIRRLRFWPLSKVLTDKYDFSEEDAIAMQD 445 >At5g20060.2 68418.m02389 phospholipase/carboxylesterase family protein similar to lysophospholipase II [Mus musculus] GI:4589453; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family Length = 252 Score = 26.2 bits (55), Expect = 9.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 174 SPPPMVLSVGIWPSGWMPCSR 112 +P P+ LS I SGW+PC++ Sbjct: 149 NPYPINLSAIIGLSGWLPCAK 169 >At5g20060.1 68418.m02388 phospholipase/carboxylesterase family protein similar to lysophospholipase II [Mus musculus] GI:4589453; contains Pfam profile PF02230: Phospholipase/Carboxylesterase family Length = 252 Score = 26.2 bits (55), Expect = 9.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 174 SPPPMVLSVGIWPSGWMPCSR 112 +P P+ LS I SGW+PC++ Sbjct: 149 NPYPINLSAIIGLSGWLPCAK 169 >At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH-dependent thioredoxin reductase, putative The last 2 exons encode thioredoxin. There is an EST match to exons 5-7, and the distance between exon 7 and exon 8 is only 90bp. It is unlikely this is two separate genes, but more likely a hybrid protein. Length = 529 Score = 26.2 bits (55), Expect = 9.3 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 247 KIDEDSTGYVLASSGLAEKSVERMVSTPD 161 +++ DS+GYVL G + SVE + + D Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364 >At1g67520.1 68414.m07692 lectin protein kinase family protein contains Pfam domains PF00069: Protein kinase domain and PF01453: Lectin (probable mannose binding) Length = 587 Score = 26.2 bits (55), Expect = 9.3 Identities = 12/49 (24%), Positives = 22/49 (44%) Frame = +2 Query: 164 GGGDHSFNTFFSETGAGKHVPRAVFVDLEPMLLMRSALAHTDSCFIQNN 310 G G +NT+ + G+ H PR +++ ++ L SC + N Sbjct: 350 GTGCEIWNTYPTNKGSASHSPRTIYIRGNDQEMLLRELGIDRSCIHKRN 398 >At1g23380.2 68414.m02924 homeobox transcription factor (KNAT6) nearly identical to homeodomain transcription factor KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana], homeodomain transcription factor KNAT6 (KNAT6S) [Arabidopsis thaliana] GI:15991300 Length = 326 Score = 26.2 bits (55), Expect = 9.3 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 77 VQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDH 178 +Q+ N C + G+ DG + +D+ + GGDH Sbjct: 177 MQLRNLCTGVESAR-GVSEDGVISSDEELSGGDH 209 >At1g23380.1 68414.m02925 homeobox transcription factor (KNAT6) nearly identical to homeodomain transcription factor KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana], homeodomain transcription factor KNAT6 (KNAT6S) [Arabidopsis thaliana] GI:15991300 Length = 327 Score = 26.2 bits (55), Expect = 9.3 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 77 VQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDH 178 +Q+ N C + G+ DG + +D+ + GGDH Sbjct: 178 MQLRNLCTGVESAR-GVSEDGVISSDEELSGGDH 210 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,415,920 Number of Sequences: 28952 Number of extensions: 229090 Number of successful extensions: 782 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 770 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 665183504 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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