Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0785
(426 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 156 7e-39
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 156 7e-39
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 155 2e-38
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 155 2e-38
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 137 3e-33
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 137 3e-33
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 131 2e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 66 9e-12
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 66 9e-12
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 66 1e-11
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 66 1e-11
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 65 2e-11
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 64 4e-11
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 64 4e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 9e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 9e-11
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 62 2e-10
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 61 3e-10
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 1.7
At2g20300.1 68415.m02371 protein kinase family protein contains ... 28 3.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 4.0
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 4.0
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 4.0
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 4.0
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 27 4.0
At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /... 27 4.0
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 5.3
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 7.0
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 7.0
At5g22840.1 68418.m02670 protein kinase family protein contains ... 26 9.3
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 26 9.3
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 26 9.3
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 26 9.3
At1g67520.1 68414.m07692 lectin protein kinase family protein co... 26 9.3
At1g23380.2 68414.m02924 homeobox transcription factor (KNAT6) n... 26 9.3
At1g23380.1 68414.m02925 homeobox transcription factor (KNAT6) n... 26 9.3
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 156 bits (378), Expect = 7e-39
Identities = 63/75 (84%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGD +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 107 bits (257), Expect = 3e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 156 bits (378), Expect = 7e-39
Identities = 63/75 (84%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGD +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 107 bits (257), Expect = 3e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (375), Expect = 2e-38
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGD +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 107 bits (257), Expect = 3e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 155 bits (375), Expect = 2e-38
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MREC+S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGD +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 107 bits (257), Expect = 3e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV LDRI KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCT 130
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 137 bits (332), Expect = 3e-33
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 106 bits (255), Expect = 5e-24
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV LDR+ KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCT 130
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 137 bits (332), Expect = 3e-33
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 106 bits (255), Expect = 5e-24
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV LDR+ KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCT 130
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 131 bits (316), Expect = 2e-31
Identities = 52/75 (69%), Positives = 66/75 (88%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE +S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G +FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVF+DLEP ++
Sbjct: 61 HVPRAVFLDLEPTVI 75
Score = 103 bits (246), Expect = 7e-23
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQCT 426
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIV L+R+ KLAD CT
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCT 130
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI P G+ D + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
Score = 58.8 bits (136), Expect = 1e-09
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI P G+ D + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
Score = 58.8 bits (136), Expect = 1e-09
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 65.7 bits (153), Expect = 1e-11
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI GQ D + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
Score = 58.4 bits (135), Expect = 2e-09
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 65.7 bits (153), Expect = 1e-11
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLER-INVYYNEASGGR 59
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 60 YVPRAVLMDLEP 71
Score = 60.9 bits (141), Expect = 4e-10
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 74 MDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---HSFNTFFSETG 208
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 209 AGKHVPRAVFVDLEP 253
G++VPRA+ +DLEP
Sbjct: 56 CGRYVPRAILMDLEP 70
Score = 62.9 bits (146), Expect = 9e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 64.1 bits (149), Expect = 4e-11
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI GQ D + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
Score = 54.8 bits (126), Expect = 2e-08
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLAD 417
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ C EHGI G+ D T N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 60 YVPRAVLMDLEP 71
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 74 MDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 9e-11
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +2
Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
RE +++ VGQ G QIG W+ CLEHGI DG + D GGD + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL-EDFATQGGDRK-DVFFYQADDQHY 60
Query: 221 VPRAVFVDLEPMLL 262
+PRA+ +DLEP ++
Sbjct: 61 IPRALLIDLEPRVI 74
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 9e-11
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +2
Query: 41 RECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKH 220
RE +++ VGQ G QIG W+ CLEHGI DG + D GGD + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL-EDFATQGGDRK-DVFFYQADDQHY 60
Query: 221 VPRAVFVDLEPMLL 262
+PRA+ +DLEP ++
Sbjct: 61 IPRALLIDLEPRVI 74
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 61.7 bits (143), Expect = 2e-10
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ LEHGI G+ D + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
Score = 61.3 bits (142), Expect = 3e-10
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 61.3 bits (142), Expect = 3e-10
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYYVLDRILKLADQC 423
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD + K A+ C
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Score = 60.9 bits (141), Expect = 4e-10
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +2
Query: 38 MRECMSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI G+ + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 28.7 bits (61), Expect = 1.7
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 74
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 73 G-LANVYRHALTHFN 32
G ANVYR LTHF+
Sbjct: 808 GSAANVYRIVLTHFS 822
>At2g20300.1 68415.m02371 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 744
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 271 GPHQQHRFKIDEDSTGYVLASSGLAEKSVERMVSTPDGLVCG 146
G H+ R+ + ++T +S + VE + STP G CG
Sbjct: 75 GHHRHRRWHLRRNATAVSPSSHDCQQTCVEPLTSTPFGSPCG 116
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 244 IDEDSTGYVLASSGLAEKSVERMVSTPDGLVCGHLAIRLDAVLQAVKLPAGI 89
I E S G +A+ V R V T +G + +DA++QA KLP I
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSI 287
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 207 PVSLKKVLKEWSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 82
PVS L SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /
CAF identical to RNA helicase/RNAseIII CAF protein
GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
Length = 1909
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 119 HGIQPDGQMPTDKTIGGGDHSFNTFFSETGAGKHVPR 229
H +G++P D + GG+H + GK P+
Sbjct: 612 HDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPK 648
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 149 WASGHQAGCRAPGSKAPSRHYRSGLR 72
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 273 HWHIQTVVSSRTTYYW*GR 329
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 273 HWHIQTVVSSRTTYYW*GR 329
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At5g22840.1 68418.m02670 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 538
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 137 GQMPTDKTIGGGDHSFNTFFSETGAGKHVPRAVFVDLEPMLLMRSALAHTDSCFIQN 307
G MP K GG HS FF+ G +H+ R F L +L + + D+ +Q+
Sbjct: 391 GMMPR-KIALGGRHS-RDFFNRQGELRHIRRLRFWPLSKVLTDKYDFSEEDAIAMQD 445
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 174 SPPPMVLSVGIWPSGWMPCSR 112
+P P+ LS I SGW+PC++
Sbjct: 149 NPYPINLSAIIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 174 SPPPMVLSVGIWPSGWMPCSR 112
+P P+ LS I SGW+PC++
Sbjct: 149 NPYPINLSAIIGLSGWLPCAK 169
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 247 KIDEDSTGYVLASSGLAEKSVERMVSTPD 161
+++ DS+GYVL G + SVE + + D
Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364
>At1g67520.1 68414.m07692 lectin protein kinase family protein
contains Pfam domains PF00069: Protein kinase domain and
PF01453: Lectin (probable mannose binding)
Length = 587
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 164 GGGDHSFNTFFSETGAGKHVPRAVFVDLEPMLLMRSALAHTDSCFIQNN 310
G G +NT+ + G+ H PR +++ ++ L SC + N
Sbjct: 350 GTGCEIWNTYPTNKGSASHSPRTIYIRGNDQEMLLRELGIDRSCIHKRN 398
>At1g23380.2 68414.m02924 homeobox transcription factor (KNAT6)
nearly identical to homeodomain transcription factor
KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana],
homeodomain transcription factor KNAT6 (KNAT6S)
[Arabidopsis thaliana] GI:15991300
Length = 326
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 77 VQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDH 178
+Q+ N C + G+ DG + +D+ + GGDH
Sbjct: 177 MQLRNLCTGVESAR-GVSEDGVISSDEELSGGDH 209
>At1g23380.1 68414.m02925 homeobox transcription factor (KNAT6)
nearly identical to homeodomain transcription factor
KNAT6 (KNAT6L) GI:15991302 [Arabidopsis thaliana],
homeodomain transcription factor KNAT6 (KNAT6S)
[Arabidopsis thaliana] GI:15991300
Length = 327
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 77 VQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDH 178
+Q+ N C + G+ DG + +D+ + GGDH
Sbjct: 178 MQLRNLCTGVESAR-GVSEDGVISSDEELSGGDH 210
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,415,920
Number of Sequences: 28952
Number of extensions: 229090
Number of successful extensions: 782
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 665183504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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