BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0783
(584 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein. 26 0.78
AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18... 26 0.78
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 26 1.0
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 26 1.0
AF457566-1|AAL68796.1| 147|Anopheles gambiae multiprotein bridg... 26 1.0
CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein ... 24 4.2
>L04753-1|AAA29357.1| 511|Anopheles gambiae alpha-amylase protein.
Length = 511
Score = 26.2 bits (55), Expect = 0.78
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 10 FYGFHNEPFTVLIIVKTILKVSLY 81
F F+NEPF + +I++T L +Y
Sbjct: 432 FVAFNNEPFDMNVILQTGLPAGIY 455
>AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18D
protein.
Length = 380
Score = 26.2 bits (55), Expect = 0.78
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 408 CPRGSRNTKTSYT*ENSNACCPR 340
C RG+R T SY+ + CCP+
Sbjct: 41 CKRGNRITVCSYSATEAIVCCPQ 63
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 25.8 bits (54), Expect = 1.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -3
Query: 228 KARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSDLT 94
K N EGY+ + + +E+H F N+S+H+ T
Sbjct: 129 KGTLNLEGYRKILRRKMLPYARQKFGDEEHYIFQHDNDSKHTSRT 173
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 25.8 bits (54), Expect = 1.0
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -3
Query: 216 NREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSDLT 94
N EGY+ + + + +E+H F N+S+H+ T
Sbjct: 205 NSEGYRKILSREMLPYARQQFGDEEHYIFQHDNDSKHTSRT 245
>AF457566-1|AAL68796.1| 147|Anopheles gambiae multiprotein bridging
factor-like proteinprotein.
Length = 147
Score = 25.8 bits (54), Expect = 1.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -3
Query: 255 TIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSDL 97
T++TE I KAR+ + TQ N + + A+ + + +E RH L
Sbjct: 21 TLKTESAINKARRQGIPVETTQKFNAGTNKQHVAAKNTAKLDRETDELRHKTL 73
>CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein
protein.
Length = 207
Score = 23.8 bits (49), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 114 SRHSDLTNTSTIKTNFENSFYNDENGEGFVMKTVKK 7
S+ + N S+ K+NF S N + E TVKK
Sbjct: 3 SKRKQVLNRSSSKSNFTKSAINRKRPEKSNGSTVKK 38
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,851
Number of Sequences: 2352
Number of extensions: 11520
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -