Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0783
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.20
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 33 0.20
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 29 1.8
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 29 1.8
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 29 1.8
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 29 1.8
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 28 4.2
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81457-9|CAI94503.1| 263|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF016449-1|AAG23996.2| 122|Caenorhabditis elegans Hypothetical ... 28 5.6
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 28 5.6
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 27 7.4
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 7.4
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 27 7.4
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 27 7.4
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ... 27 7.4
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 27 7.4
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70311-10|CAA94377.3| 602|Caenorhabditis elegans Hypothetical p... 27 9.8
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 27 9.8
U80840-11|AAB37935.3| 392|Caenorhabditis elegans Hypothetical p... 27 9.8
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 32.7 bits (71), Expect = 0.20
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -3
Query: 297 NENEQRYTASKEPGTIQTEEQ-IEKARKN-REGYQPTQNINKKSMSEKSIAEEKHEDFVQ 124
N+NE Y A G ++ EE+ + + KN + G + N+ +++ + EEK+ED
Sbjct: 25 NDNESFYNAD---GDVELEEEEVHETPKNFKNGGRFKTNMTNPKVNDLTTIEEKNEDLRS 81
Query: 123 RNESRHSDLTNTSTIKTNFENSFYNDENGEGFV 25
SR + + +F + F GE +
Sbjct: 82 AASSRSASRPASVMSDKSFSSQFEFQSGGENAI 114
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 32.7 bits (71), Expect = 0.20
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -3
Query: 297 NENEQRYTASKEPGTIQTEEQ-IEKARKN-REGYQPTQNINKKSMSEKSIAEEKHEDFVQ 124
N+NE Y A G ++ EE+ + + KN + G + N+ +++ + EEK+ED
Sbjct: 25 NDNESFYNAD---GDVELEEEEVHETPKNFKNGGRFKTNMTNPKVNDLTTIEEKNEDLRS 81
Query: 123 RNESRHSDLTNTSTIKTNFENSFYNDENGEGFV 25
SR + + +F + F GE +
Sbjct: 82 AASSRSASRPASVMSDKSFSSQFEFQSGGENAI 114
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -3
Query: 375 YT*ENSNACCPRK---HSTSFKRNH**KGNENEQRYTASKEPGTIQTEEQIEKARKN-RE 208
+T E + C +K H T + NH +NE+ + + +E++EK ++ ++
Sbjct: 253 FTAETDDFCSLQKENVHCTILRINHKEVAEKNEEDKKEEEPKKEEEKKEEVEKKEEDEKK 312
Query: 207 GYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSD 100
+P + KK +K E+K E+ + E + +
Sbjct: 313 DEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEE 348
>Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical
protein F56D5.5 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -3
Query: 285 QRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRH 106
Q T S + + EE++++ + EG + QN+ +K E+ + + K E + RNE +
Sbjct: 134 QTETRSVKEALKEKEEEVKRLLVDMEG-KTFQNLTEKGRMEEEMNDAKREAQILRNEMK- 191
Query: 105 SDLTNTSTIKTN 70
L T K N
Sbjct: 192 -SLQKNMTAKEN 202
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3
Query: 174 SMSEKSIAEEKHED-FVQRN--ESRHSDLTNTSTIKTNFENSFYNDE 43
SM E AE ++ +Q+ ES + TST+KT F N+ YND+
Sbjct: 274 SMIETWFAERSEQEAHLQKGMLESEKFYMQQTSTVKTVFMNALYNDD 320
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 252 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 85
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 202 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 260
Query: 84 TIKTNFENSFYNDE 43
T K F N+FYN E
Sbjct: 261 TTKIAFMNAFYNPE 274
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 252 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 85
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 202 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 260
Query: 84 TIKTNFENSFYNDE 43
T K F N+FYN E
Sbjct: 261 TTKIAFMNAFYNPE 274
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 252 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 85
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 176 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 234
Query: 84 TIKTNFENSFYNDE 43
T K F N+FYN E
Sbjct: 235 TTKIAFMNAFYNPE 248
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 252 IQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEK----HEDFVQRNESRHSDLTNTS 85
IQT+ +K N P+ + +SE+ + + + D V + E+ + T
Sbjct: 141 IQTDVDEQKPSSNNSAPLPSMELEMAKLSEQIVEMHRAVCSYVDPVTKRENFDMKM-ETE 199
Query: 84 TIKTNFENSFYNDE 43
T K F N+FYN E
Sbjct: 200 TTKIAFMNAFYNPE 213
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 206 PSRFLRAFSICSSVCIVPGSLLAVYRCSFSFPFYQWFLLNDVECFLGQQAF 358
P R L F ++VC+ L V +C + P Y + N+ F+G Q+F
Sbjct: 509 PKRPLVTFVRDTNVCVFREDLETVEKCGATKPLYLYINKNNGGYFMGIQSF 559
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 404 PE-VPETRKQAIPEKIQTPAVQENIQHRSKETIDRKEMKMNNGIRQ--ARSLGRY 249
PE +PET ++ +PE + P +N E D E M N + Q AR G++
Sbjct: 139 PETIPETLEETVPETVPEPERLQNRMPLDVEISDSFEKAMWNHVSQNAARLTGKF 193
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = -3
Query: 297 NENEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRN 118
NE + +Y + ++ EE ++ R Y+ KK++ E E+ DF +N
Sbjct: 120 NEEDYKYKRERRLLLLRMEELVQDTASRRRAYR------KKALEEAIDNYEQKLDFAVKN 173
Query: 117 ESRHSDLTNTSTIKTNFENSFYND 46
ES+ + ++ T F Y D
Sbjct: 174 ESQWTFMSAMYFAGTLFTTIGYGD 197
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = -3
Query: 297 NENEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRN 118
NE + +Y + ++ EE ++ R Y+ KK++ E E+ DF +N
Sbjct: 120 NEEDYKYKRERRLLLLRMEELVQDTASRRRAYR------KKALEEAIDNYEQKLDFAVKN 173
Query: 117 ESRHSDLTNTSTIKTNFENSFYND 46
ES+ + ++ T F Y D
Sbjct: 174 ESQWTFMSAMYFAGTLFTTIGYGD 197
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -3
Query: 339 KHSTSFKRNH**KGNENEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEK 160
K +S K H K +++ KE + + +R + ++ +K+ EK
Sbjct: 143 KKRSSKKETHEEKEKSEKKKSAEEKEKKKKSSSSKERHKSSDRSSEKSSEKSSKEKKKEK 202
Query: 159 SIAEEKHEDFVQRNESRHSDLTNTSTIKTNFENSFYNDENG-EGF 28
S +EK + + RH ++ N+ENG EG+
Sbjct: 203 STTDEKPKKSKKDPSERHFKRQDSMIAVNGDAPDTPNNENGDEGY 247
>Z81457-9|CAI94503.1| 263|Caenorhabditis elegans Hypothetical
protein C01G12.13 protein.
Length = 263
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 264 EPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSDLTNTS 85
+P ++ E ++ K +NRE + + ++ EK++ E + V + E + D+T S
Sbjct: 46 DPAVLEKERKM-KIAENREKMRKKREKQQQPQFEKAVVETVVKREVDQKEMKLEDVTQPS 104
Query: 84 -TIKTNFENSFYNDENGE 34
+I++N + + +N +
Sbjct: 105 ASIESNEQQPSQDTKNSQ 122
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
protein C05D12.3c protein.
Length = 1001
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 240 EQIEKARKNREGY--QPTQNINKKSMSEKSIAEEKHEDFVQRNE 115
EQ+E R N +G TQN NK SE IA FVQ+ +
Sbjct: 105 EQLETLRSNFKGMVNSITQNWNKNKESENWIANFMFYGFVQQGQ 148
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
protein C05D12.3a protein.
Length = 1039
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 240 EQIEKARKNREGY--QPTQNINKKSMSEKSIAEEKHEDFVQRNE 115
EQ+E R N +G TQN NK SE IA FVQ+ +
Sbjct: 105 EQLETLRSNFKGMVNSITQNWNKNKESENWIANFMFYGFVQQGQ 148
>AF016449-1|AAG23996.2| 122|Caenorhabditis elegans Hypothetical
protein C50H11.8 protein.
Length = 122
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 134 SSCFSSAMDFSDILFLFIF 190
S FSS+M FS +LFLF F
Sbjct: 40 SRTFSSSMSFSSLLFLFAF 58
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = -3
Query: 294 ENEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNE 115
+NE +EP ++T E+ + E ++ N K+ ++E++E + E
Sbjct: 150 DNEDYSDYPEEPDLVETAGHSERDEEYDEVFEEVHNRKLDKSRVKTASKERNELAKKYAE 209
Query: 114 SRHSDLTNTSTIKTNFENSF-YNDENGEGFVMKTVKKK 4
+K N+ + N + GE F+ ++ K
Sbjct: 210 QNAKLKLKLKEVKNNYASMLEKNKKKGEEFIKQSENSK 247
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 27.5 bits (58), Expect = 7.4
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 2/135 (1%)
Frame = -3
Query: 402 RGSRNTKTSYT*ENSNACCPRKHSTSFKRNH**KGNENEQRYTASKEPGTIQTEEQIEKA 223
R R S+T + + + KR H + + Q Y + + EE+++K
Sbjct: 34 RSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQHAKLQDYEERRRTEREKEEEELKKL 93
Query: 222 RKNREGYQPTQNINKKSMSEKSIA--EEKHEDFVQRNESRHSDLTNTSTIKTNFENSFYN 49
++ +E + + +K M E+ A + + ++ +R D N K
Sbjct: 94 KEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQLSGF 153
Query: 48 DENGEGFVMKTVKKK 4
G+G TV KK
Sbjct: 154 QTGGQGGRNFTVAKK 168
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 7.4
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 2/135 (1%)
Frame = -3
Query: 402 RGSRNTKTSYT*ENSNACCPRKHSTSFKRNH**KGNENEQRYTASKEPGTIQTEEQIEKA 223
R R S+T + + + KR H + + Q Y + + EE+++K
Sbjct: 868 RSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQHAKLQDYEERRRTEREKEEEELKKL 927
Query: 222 RKNREGYQPTQNINKKSMSEKSIA--EEKHEDFVQRNESRHSDLTNTSTIKTNFENSFYN 49
++ +E + + +K M E+ A + + ++ +R D N K
Sbjct: 928 KEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQLSGF 987
Query: 48 DENGEGFVMKTVKKK 4
G+G TV KK
Sbjct: 988 QTGGQGGRNFTVAKK 1002
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.4
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 2/135 (1%)
Frame = -3
Query: 402 RGSRNTKTSYT*ENSNACCPRKHSTSFKRNH**KGNENEQRYTASKEPGTIQTEEQIEKA 223
R R S+T + + + KR H + + Q Y + + EE+++K
Sbjct: 34 RSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQHAKLQDYEERRRTEREKEEEELKKL 93
Query: 222 RKNREGYQPTQNINKKSMSEKSIA--EEKHEDFVQRNESRHSDLTNTSTIKTNFENSFYN 49
++ +E + + +K M E+ A + + ++ +R D N K
Sbjct: 94 KEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQLSGF 153
Query: 48 DENGEGFVMKTVKKK 4
G+G TV KK
Sbjct: 154 QTGGQGGRNFTVAKK 168
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = -3
Query: 282 RYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHS 103
R+ + P T + E+ + K+ K PT + + SEK+ + K E + ES +
Sbjct: 3 RFCVALTPSTSEDEQVVRKSEKPASK-PPTPEVEDCTFSEKNNDQRKIEKETESEESSNL 61
Query: 102 DLTNT-STIK--TNFENSFYNDENGEGFVMKTVKKK 4
+I+ TNF E+ G VKK+
Sbjct: 62 KFPPARPSIRNATNFRRIICISESDSGKEEPVVKKE 97
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = -3
Query: 282 RYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHS 103
R+ + P T + E+ + K+ K PT + + SEK+ + K E + ES +
Sbjct: 3 RFCVALTPSTSEDEQVVRKSEKPASK-PPTPEVEDCTFSEKNNDQRKIEKETESEESSNL 61
Query: 102 DLTNT-STIK--TNFENSFYNDENGEGFVMKTVKKK 4
+I+ TNF E+ G VKK+
Sbjct: 62 KFPPARPSIRNATNFRRIICISESDSGKEEPVVKKE 97
>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
protein Y37B11A.2 protein.
Length = 1133
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/53 (20%), Positives = 31/53 (58%)
Frame = -3
Query: 294 ENEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHE 136
EN+++++ ++ T+E + A ++ + + T+ +++ S+ E S +E+ E
Sbjct: 289 ENQRQFSREMTACSVMTDETVVAAAEHSQPVEQTRLLSQTSIGEPSTSEKSVE 341
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 231 EKARKNREGYQPTQNINKKSMSEKS 157
E+ RK E YQPT NK ++SEKS
Sbjct: 48 ERLRKEIESYQPT---NKSNISEKS 69
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 27.1 bits (57), Expect = 9.8
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = -3
Query: 411 TCPRGSRNTKTSYT*ENSNACCPRKHSTSFKRNH**KGNENEQRYTASKEPGT-IQTEEQ 235
+ P + + K+ + N K ++ ++N K +++ + T++ EP T Q E
Sbjct: 205 SAPASTESKKSKKIKKKKNKKSKDKKKSNSRKNK--KNKKSKGKSTSTSEPPTPNQPETG 262
Query: 234 IEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNESRHSDLTNTSTIKTNFE 64
++ A + R P N+N +MS +S ++ E V+ +D+ S +KT E
Sbjct: 263 VQTANELRND-APESNVN-TAMSIQSPVQDTPEPDVKTASEAKNDIPE-SGVKTAAE 316
>Z70311-10|CAA94377.3| 602|Caenorhabditis elegans Hypothetical
protein T25B9.6 protein.
Length = 602
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 582 MDKDSQKVKRTKSFWKFGRDYRRGKMEGMSLWQHRDIVDHC 460
+D+ S++ + SFWK DY + +G LWQ + + C
Sbjct: 152 LDRASEQF--SDSFWKESTDYDQAVKKGEILWQKFEELIEC 190
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/86 (22%), Positives = 31/86 (36%)
Frame = -3
Query: 291 NEQRYTASKEPGTIQTEEQIEKARKNREGYQPTQNINKKSMSEKSIAEEKHEDFVQRNES 112
N + + K+P E ++ PTQ +KKS E+ + + E
Sbjct: 200 NSEMPLSDKKPDRKPQETPRRSKQRTPGPMMPTQKSSKKSAKERKLEPTQEETMKSGGGG 259
Query: 111 RHSDLTNTSTIKTNFENSFYNDENGE 34
S T T N+ N E+G+
Sbjct: 260 AKSGRTTPKTAGMATANAPSNTESGK 285
>U80840-11|AAB37935.3| 392|Caenorhabditis elegans Hypothetical
protein F08D12.12 protein.
Length = 392
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = -3
Query: 294 ENEQRYTASKEP----GTIQTEEQIEKARKNREGYQPTQNINKKS 172
E +Q+ +SK+P G ++ E+ E+ARK +G + + + KKS
Sbjct: 5 EQQQQQESSKKPERRAGRMKNSEE-ERARKEPDGKEDGKRVRKKS 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,912
Number of Sequences: 27780
Number of extensions: 265826
Number of successful extensions: 1120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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