Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0778
         (559 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2V4 Cluster: Putative uncharacterized protein PFI097...    35   1.5  
UniRef50_A0EGB7 Cluster: Chromosome undetermined scaffold_95, wh...    34   2.0  
UniRef50_Q8IBC6 Cluster: Putative uncharacterized protein MAL8P1...    33   6.0  
UniRef50_A4XFU5 Cluster: Binding-protein-dependent transport sys...    32   7.9  
UniRef50_Q18702 Cluster: Putative uncharacterized protein; n=2; ...    32   7.9  
UniRef50_Q16JA7 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  

>UniRef50_Q8I2V4 Cluster: Putative uncharacterized protein PFI0975c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFI0975c - Plasmodium falciparum (isolate 3D7)
          Length = 3381

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 11/39 (28%), Positives = 27/39 (69%)
 Frame = +1

Query: 259  KKDTKNQNTLNQCHIRKAFLHVGNTV*FQRHTYTDTFLK 375
            K+D + +N +N+ +++  F+H+ N    +++ YT++F+K
Sbjct: 1388 KQDNEKENHINEPNVKNNFIHIENVKNKKKYIYTESFMK 1426


>UniRef50_A0EGB7 Cluster: Chromosome undetermined scaffold_95, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_95, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1377

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 374  NNDYKYVTYNYVIIINNYSLIFSIERNVLVTWCCINTNVNYQIYS 508
            NN +  +  N VIII N +L  + + N+  T C ++T+ NY  YS
Sbjct: 964  NNQFVSLLNNTVIIILNNNLKNTSQTNINFTQCLVSTSYNYTSYS 1008


>UniRef50_Q8IBC6 Cluster: Putative uncharacterized protein MAL8P1.7;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.7 - Plasmodium falciparum
           (isolate 3D7)
          Length = 2130

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +3

Query: 99  NINCIDKAISKLIFYKLLSSM*LKNDNYYYLFTNITASRVSQKYHNSKLHFQ*KKRYKKS 278
           NI   +K +  L  YK++ +  +  +  Y + +NI A+ +S  Y  +K + +    YK+ 
Sbjct: 687 NIKQDEKKLKSLNVYKIIHN--INKETTYNIASNIKAN-ISHIYEKNKTYNKHINNYKEY 743

Query: 279 KHIEPVSHTKGI 314
           K I+P+S    I
Sbjct: 744 KKIDPISFNNTI 755


>UniRef50_A4XFU5 Cluster: Binding-protein-dependent transport
           systems inner membrane component precursor; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Binding-protein-dependent transport systems inner
           membrane component precursor - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 294

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 398 YNYVIIINNYSLIFSIERNVLVTWCCI 478
           YNY+ +I++Y   FS + N+++T  CI
Sbjct: 55  YNYIQLIHDYDFWFSFKNNLIITLLCI 81


>UniRef50_Q18702 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 474

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +3

Query: 171 NDNYYYLFTNITASRVSQKYHNSKLHFQ*KKRYKK 275
           N+NYY LF+ I +  VS+K  +  L+F+ +K YKK
Sbjct: 405 NENYYNLFSLIIS--VSRKKKSENLNFENRKNYKK 437


>UniRef50_Q16JA7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 410

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +1

Query: 148 FCPVCNLKMTITIIYLQILRHLGFHKNITTQSCIFSKKKDTKNQNTLNQCHIR 306
           FC +C+ K  I+I  L+   HL  H +I   +C++  KK T N N LN  HIR
Sbjct: 273 FCTLCDKKF-ISISGLKY--HLKRHTDIKAFACVYCSKKFTANSN-LN-AHIR 320


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,795,128
Number of Sequences: 1657284
Number of extensions: 8859554
Number of successful extensions: 22170
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22131
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)