Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0778
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.14 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    27   0.14 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.25 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.58 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   3.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +1

Query: 145 NFCPVCNLKMTITIIYLQILRHLGFHKNITTQSC 246
           N C  CN+     ++Y   + + GFH   T   C
Sbjct: 471 NSCQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMC 504


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 151 CPVCNLKMTITIIYLQILR-HLGFHKNITTQSCIFSKKKD 267
           CPVC+ K T  ++  Q +R H G   ++T +    ++ KD
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKD 236


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 177 NYYYLFTNITASRVSQKYH 233
           ++YYL TN+T +  ++KY+
Sbjct: 38  SWYYLLTNLTYNNTNRKYY 56


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 303 YVTLVQCVLIFCIFFF 256
           YV+L+Q V +FC F +
Sbjct: 137 YVSLLQLVFVFCYFIY 152


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 165 LKNDNYYYLFTNI 203
           LK+DNYY L T+I
Sbjct: 28  LKHDNYYELETHI 40


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 165 LKNDNYYYLFTNI 203
           LK+DNYY L T+I
Sbjct: 342 LKHDNYYELETHI 354


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 165 LKNDNYYYLFTNI 203
           LK+DNYY L T+I
Sbjct: 575 LKHDNYYELETHI 587


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 165 LKNDNYYYLFTNI 203
           LK+DNYY L T+I
Sbjct: 575 LKHDNYYELETHI 587


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 291 VQCVLIFCIFFFTENAALSCDIFV 220
           V  +L+ CI++F     L C  F+
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFI 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,261
Number of Sequences: 336
Number of extensions: 2829
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)