Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0776
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 141 4e-34
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 140 6e-34
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 140 6e-34
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 140 7e-34
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 140 7e-34
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 137 5e-33
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 136 2e-32
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 134 5e-32
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 125 3e-29
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 64 6e-11
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 59 2e-09
12_02_1282 + 27528159-27529148,27529549-27529614 57 1e-08
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 56 2e-08
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 53 1e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 1e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 44 1e-04
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 39 0.003
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 31 0.88
08_02_0238 + 14665813-14668798,14669088-14669125 29 2.7
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781... 29 3.5
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 6.2
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 8.2
09_02_0456 - 9525067-9525422,9525679-9528226 27 8.2
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 141 bits (341), Expect = 4e-34
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 306 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 365
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 366 PSIVHRKCF 374
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 272 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 306
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 140 bits (340), Expect = 6e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESG 368
Query: 290 PSIVHRKCF 264
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 140 bits (340), Expect = 6e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESG 368
Query: 290 PSIVHRKCF 264
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFP 309
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 140 bits (339), Expect = 7e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 312 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESG 371
Query: 290 PSIVHRKCF 264
P+IVHRKCF
Sbjct: 372 PAIVHRKCF 380
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL G+TM+P
Sbjct: 278 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFP 312
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 140 bits (339), Expect = 7e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 137 bits (332), Expect = 5e-33
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESG 368
Query: 290 PSIVHRKCF 264
P+IVHRKCF
Sbjct: 369 PAIVHRKCF 377
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL G+TM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 136 bits (328), Expect = 2e-32
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 308 PGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 367
Query: 290 PSIVHRKCF 264
P IVH KCF
Sbjct: 368 PGIVHMKCF 376
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHE TYNSIMKCDVDIRKDL G+TM+P
Sbjct: 274 GIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFP 308
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 134 bits (324), Expect = 5e-32
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 308 PGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESG 367
Query: 290 PSIVHRKCF 264
P IVH KCF
Sbjct: 368 PGIVHMKCF 376
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHE TYNSIMKCDVDIRKDL G+TM+P
Sbjct: 274 GIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFP 308
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 125 bits (301), Expect = 3e-29
Identities = 63/83 (75%), Positives = 67/83 (80%), Gaps = 14/83 (16%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ------------- 330
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVAR 368
Query: 329 -QMWISKQEYDESGPSIVHRKCF 264
QMWISK EYDESGP+IVHRKCF
Sbjct: 369 MQMWISKGEYDESGPAIVHRKCF 391
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL G+TM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKQE 306
G DR Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++K +
Sbjct: 326 GFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGD 384
Query: 305 YDESGPSIVHRKCF 264
YDE+GPSIVH+KCF
Sbjct: 385 YDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Frame = -1
Query: 464 IADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 306
+ +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 414 LKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+ +KI +MWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSS--MKI------------------------KMWIAKAEYDESG 342
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 343 PSIVHRKCF 351
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
P +R++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G
Sbjct: 360 PRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMG 419
Query: 290 PSIVHRKCF 264
R+ F
Sbjct: 420 SMRCRRRFF 428
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Frame = -1
Query: 476 CTPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQE 306
C PG+++R++KE+ L P+ + I++I PP S W G +++++STF + W I K++
Sbjct: 409 CLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQ 468
Query: 305 YDE----SGPSIVH 276
+ + +GPS V+
Sbjct: 469 FRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -1
Query: 416 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 282
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -1
Query: 416 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 282
+++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 385 VEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PG+ R++ I P +K++ + W G + A+ S F + S +Y E G
Sbjct: 636 PGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHG 695
Query: 290 PSIVHRK 270
++ HRK
Sbjct: 696 ENLFHRK 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 30.7 bits (66), Expect = 0.88
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -1
Query: 416 MKIKIIAPPERKYSVWIGGSILASL 342
++++I PP RK+ V++GG++LA +
Sbjct: 366 LRLRIEDPPRRKHMVYLGGAVLAGI 390
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 360 STDPYGVLPLWRSNDLNLHCRW-GESC 437
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>08_02_1111 +
24377268-24377444,24377543-24377630,24378072-24378157,
24378358-24378511,24378723-24378883,24378964-24379632,
24379860-24380058,24380188-24380405,24380578-24380755,
24380859-24381358
Length = 809
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 494 VRWVPPCTPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 339
V W PP T D + ++ L+ S K+ +I PE+ +WI + LS
Sbjct: 323 VEWQPP-TLLTDDEAHQPMSILSASMDKMMMIWKPEKNTGLWINSVTVGELS 373
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 376 PYGSVDRSSPPSLPSNKCGS 317
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 327 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWG 428
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 363 TDPYGVLPLWRSNDLNLHCRWGE-SCD 440
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,858
Number of Sequences: 37544
Number of extensions: 385287
Number of successful extensions: 1139
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -