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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0776
         (578 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             145   3e-35
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         145   3e-35
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              144   3e-35
SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      144   3e-35
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              144   3e-35
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             143   8e-35
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)                127   6e-30
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 49   3e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  42   3e-04
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   5e-04
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          34   0.096
SB_53938| Best HMM Match : Gln-synt_N (HMM E-Value=0.78)               31   0.90 
SB_53392| Best HMM Match : Thermopsin (HMM E-Value=0.49)               29   2.1  
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.7  
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)                      27   8.4  

>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  145 bits (351), Expect = 3e-35
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 290 PSIVHRKCF 264
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376



 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        G+TMYP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYP 308


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  145 bits (351), Expect = 3e-35
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 290 PSIVHRKCF 264
           PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375



 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        G+TMYP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYP 307


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  144 bits (350), Expect = 3e-35
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 290 PSIVHRKCF 264
           PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        G+TM+P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFP 307


>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  144 bits (350), Expect = 3e-35
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 290 PSIVHRKCF 264
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376



 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        G+TMYP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYP 308


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  144 bits (350), Expect = 3e-35
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 281 PGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 340

Query: 290 PSIVHRKCF 264
           P+IVHRKCF
Sbjct: 341 PAIVHRKCF 349



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        GTTMYP
Sbjct: 247 GIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYP 281


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  143 bits (347), Expect = 8e-35
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 270 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 329

Query: 290 PSIVHRKCF 264
           P+IVHRKCF
Sbjct: 330 PAIVHRKCF 338



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 27/35 (77%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHETTYNSIMKCDVDIRKDL        GTTMYP
Sbjct: 236 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 270


>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
          Length = 149

 Score =  127 bits (307), Expect = 6e-30
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = -1

Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
           PGIADRMQKEI  LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E G
Sbjct: 81  PGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYG 140

Query: 290 PSIVHRKCF 264
           P IVHRKCF
Sbjct: 141 PPIVHRKCF 149



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = -3

Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
           GIHE  YN IMKCDVDIRKDL        G+TM+P
Sbjct: 47  GIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFP 81


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = -1

Query: 431 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 264
           + P  ++ ++I+   ++Y+VW GGS+LAS   F  +  +K +YDE GPSI     F
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
 Frame = -1

Query: 467 GIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASL 342
           G  +R+ +E+ +  P +M++K+I+     E++++ WIGGSILASL
Sbjct: 186 GFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = -1

Query: 413 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 291
           KI+I  PP RK+ V++GG++LA  +      W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -3

Query: 573  GIHETTYNSIMKCDVDIRKDL 511
            GIHE+ + SI KCD+D+R +L
Sbjct: 2318 GIHESIFKSIKKCDIDLRAEL 2338


>SB_53938| Best HMM Match : Gln-synt_N (HMM E-Value=0.78)
          Length = 140

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 366 RWIDPR-LPLYLPTNVDLETRVRRVWPLHCTQEVLLNARASLPPAARG 226
           RWIDPR   +  P NVD   R      +H +   LL +  S+P  +RG
Sbjct: 29  RWIDPRGNQIPAPPNVDSSGRSLSADGIHKSDLRLLGSSLSIPSTSRG 76


>SB_53392| Best HMM Match : Thermopsin (HMM E-Value=0.49)
          Length = 750

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
 Frame = -1

Query: 551 TPS*SATWTSV----RTCSQHRIVRWVPPCTP-----GIADRMQKEITALAPSTMKIKII 399
           +P   ATWT+V    R CS H +  ++          G+AD   K    +       K++
Sbjct: 41  SPDGGATWTTVTFSSRMCSYHDLNGFLHQDMKSNGHVGVADGKDKLYIDIVFVLTTYKVV 100

Query: 398 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 276
                 Y + I G+    L  F    ISK EY    P+I++
Sbjct: 101 VIVGDNYELDIRGTKFGELIGFDPKVISKTEYGSKLPNIMN 141


>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 583

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 382 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 263
           STP  +V    PP  PSN+  + +K   S +P   T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256


>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
 Frame = -1

Query: 473 TPGIADRMQKEITALAPSTM--------KIKIIAPP-ERKYSVWIGGSILASLSTFQQMW 321
           TPG   R+ +EI  L  S           +K+  PP     + W+GG+I  SL       
Sbjct: 90  TPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRS 149

Query: 320 ISKQEYDE 297
            +++ Y +
Sbjct: 150 TTRERYQQ 157


>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
          Length = 2442

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 364  VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTRV 248
            VD+S P SLP+ K G    +  S  P    GS+ SK T V
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTAV 1978


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,852,385
Number of Sequences: 59808
Number of extensions: 413813
Number of successful extensions: 1230
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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