Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0776
(578 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 142 2e-34
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 140 6e-34
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 140 6e-34
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 140 6e-34
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 136 1e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 136 1e-32
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 136 1e-32
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 136 1e-32
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 123 1e-28
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 117 7e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 107 5e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 95 4e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 9e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 64 5e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 2e-07
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 43 1e-04
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 2e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 42 3e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 33 0.14
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 0.97
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.3
At5g38190.1 68418.m04602 myosin heavy chain-related 30 1.3
At1g32000.1 68414.m03937 hypothetical protein 30 1.3
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 1.7
At5g43500.2 68418.m05318 expressed protein 29 3.0
At5g43500.1 68418.m05319 expressed protein 29 3.0
At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family pr... 29 3.0
At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid sy... 29 3.0
At2g39440.1 68415.m04841 expressed protein 29 3.0
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 28 3.9
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 5.2
At3g13672.1 68416.m01723 seven in absentia (SINA) family protein... 27 6.8
At2g42760.1 68415.m05295 expressed protein 27 6.8
At2g20920.1 68415.m02467 expressed protein 27 6.8
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 6.8
At2g07240.1 68415.m00831 Ulp1 protease family protein contains P... 27 6.8
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 27 9.0
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.0
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 27 9.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 142 bits (343), Expect = 2e-34
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESG 368
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL G+TM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 140 bits (339), Expect = 6e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 140 bits (339), Expect = 6e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 140 bits (339), Expect = 6e-34
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESG
Sbjct: 309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
Query: 290 PSIVHRKCF 264
PSIVHRKCF
Sbjct: 369 PSIVHRKCF 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 309
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 136 bits (328), Expect = 1e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP
Sbjct: 310 GIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
Query: 287 SIVHRKCF 264
SIVHRKCF
Sbjct: 370 SIVHRKCF 377
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHETTYNSIMKCDVDIRKDL GTTM+
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMF 308
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 136 bits (328), Expect = 1e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP
Sbjct: 310 GIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
Query: 287 SIVHRKCF 264
SIVHRKCF
Sbjct: 370 SIVHRKCF 377
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHETTYNSIMKCDVDIRKDL GTTM+
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMF 308
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 136 bits (328), Expect = 1e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGP 369
Query: 287 SIVHRKCF 264
IVHRKCF
Sbjct: 370 GIVHRKCF 377
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHETTYNSIMKCDVDIRKDL GTTM+
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMF 308
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 136 bits (328), Expect = 1e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGP 369
Query: 287 SIVHRKCF 264
IVHRKCF
Sbjct: 370 GIVHRKCF 377
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHETTYNSIMKCDVDIRKDL GTTM+
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMF 308
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 123 bits (296), Expect = 1e-28
Identities = 54/69 (78%), Positives = 61/69 (88%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G
Sbjct: 310 PGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQG 369
Query: 290 PSIVHRKCF 264
+IVHRKCF
Sbjct: 370 GAIVHRKCF 378
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMYP 469
GIHETTYNSIMKCDVDIRKDL GTTM+P
Sbjct: 276 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFP 310
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 117 bits (281), Expect = 7e-27
Identities = 51/68 (75%), Positives = 61/68 (89%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP
Sbjct: 262 GIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGP 321
Query: 287 SIVHRKCF 264
+IVH KCF
Sbjct: 322 AIVHTKCF 329
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHE TYNSIMKCD DIRKDL GTTM+
Sbjct: 227 GIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMF 260
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 107 bits (257), Expect = 5e-24
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 288
GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY+E G
Sbjct: 299 GIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGA 358
Query: 287 SIVHRKC 267
+IVHRKC
Sbjct: 359 AIVHRKC 365
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTM 475
GIHE T NSI+KC VD R+D+ GTTM
Sbjct: 264 GIHEATRNSILKCPVDTRRDMYGNILMTGGTTM 296
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 94.7 bits (225), Expect = 4e-20
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 312
GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL*PTPYCPVGTTMY 472
GIHETTYNSIMKCDVDIRKDL GTTM+
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMF 308
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 9e-16
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = -1
Query: 464 IADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKQEYDES 294
+ +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY+E
Sbjct: 372 LKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEH 431
Query: 293 GPSIVHRKC 267
G S + RKC
Sbjct: 432 GASYIQRKC 440
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 573 GIHETTYNSIMKCDVDIRKDL 511
G+ SI KCDVDIR++L
Sbjct: 336 GLPHMVMESINKCDVDIRREL 356
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = -1
Query: 467 GIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKQE 306
G R QKE L S ++ ++ PPE YS W+GG+ILA + Q ++K +
Sbjct: 291 GFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKAD 349
Query: 305 YDESGPSIVHRKCF 264
YDE+GPS+VHRKCF
Sbjct: 350 YDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
P + +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 352 PQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELG 411
Query: 290 PSIVHRKCF 264
+ R+ F
Sbjct: 412 SARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Frame = -1
Query: 506 QHRIVRWVPPCTPGIADRMQKEI------TALAPST-----MKIKIIAPPERKYSVWIGG 360
QH ++ PG+ R++KEI T L + ++++I PP RK+ V++GG
Sbjct: 296 QHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGG 355
Query: 359 SILAS-LSTFQQMWISKQEYDESGPSIVHR 273
++LA + + WI++++Y E G + +++
Sbjct: 356 AVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -1
Query: 416 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 282
+++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/61 (29%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = -1
Query: 476 CTPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQE 306
C PG+++R+++E+ PS++ I++I PP + W G ++++LS F W I++++
Sbjct: 403 CLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQ 462
Query: 305 Y 303
+
Sbjct: 463 F 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 470 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 291
PG+ +R++ I + P I ++ + W G S A+ F +K +YDE G
Sbjct: 651 PGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 0.97
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 366 DPYGVLPLWRSNDLNLHCRW-GESCD 440
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 467
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At5g38190.1 68418.m04602 myosin heavy chain-related
Length = 969
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 501 PYCPVGTTMYPWNRRPYAKGNHSSRPIDNE 412
P PVG +YPW R P + S P+ +
Sbjct: 840 PALPVGEPLYPWRRPPLIAASPSFTPVGRD 869
>At1g32000.1 68414.m03937 hypothetical protein
Length = 181
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 501 PYCPVGTTMYPWNRRPYAKGNHSSRPIDNE 412
P PVG +YPW R P + S P+ +
Sbjct: 52 PALPVGEPLYPWRRPPVIAASPSFTPVGRD 81
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 494 VRWVPPCTPGIADRM--QKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 339
V W PP I R+ + ++ L+ S K +I PE+K VW+ + LS
Sbjct: 310 VEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELS 363
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 473 TPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQE 306
T G+ +++ + P T I + + E ++ W GG+IL L ++ WI + +
Sbjct: 495 TKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQ 554
Query: 305 YDESG 291
+ +G
Sbjct: 555 WMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 473 TPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQE 306
T G+ +++ + P T I + + E ++ W GG+IL L ++ WI + +
Sbjct: 507 TKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQ 566
Query: 305 YDESG 291
+ +G
Sbjct: 567 WMVNG 571
>At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 296
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 459 GDSRGTWWYPPDNTVLATSPYGCPRRT 539
G S G WW P NT S Y P T
Sbjct: 9 GISTGAWWSSPTNTAAVFSGYSLPCST 35
>At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid
synthase family protein similar to cyclopropane synthase
[Sterculia foetida] GI:21069167; contains Pfam profile
PF02353: Cyclopropane-fatty-acyl-phospholipid synthase
Length = 406
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 346 EARIDPPIHTEYFLSGGAMILIFIVDGARAVIS-FCIRSAIP-GVHGGTHRTIRCW 507
E+R+ TEY GG + + V A A S CI + G+H + T+RCW
Sbjct: 281 ESRLTSGFITEYIFPGGCLPSLARVTSAMASSSRLCIENVENIGIH--YYHTLRCW 334
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 315 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 440
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -3
Query: 405 DHCSSREEVLRMDRWIDPRLPLYLPTNVDLETRVRRV 295
D C + +L MDR + P+ + + ++D+ T+V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDF 443
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At3g13672.1 68416.m01723 seven in absentia (SINA) family protein
low similarity to SP|P21461 Developmental protein seven
in absentia {Drosophila melanogaster}; contains Pfam
profile PF03145: Seven in absentia protein family
Length = 216
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 RSNDLNLHCRWGESCDFLLHTVGDSRGTWWYPPDNTV-LATSPYGCP 530
R NDL + R E DF +HT S + P D+ PY CP
Sbjct: 4 RINDLQVESRVHELLDFPVHTNQISSAIYECPNDHIENPKKKPYNCP 50
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 444 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTNVDLETRVRRVW 292
GN ++RP +E DHC R+ ++ I R+P + VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g20920.1 68415.m02467 expressed protein
Length = 287
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 354 PRLPLYLPTNVDLETRVRRVWPLHCTQEVLLNARASLPPAARGR 223
P PLYLPT + +R ++W +L R PP A R
Sbjct: 22 PLHPLYLPTKLQFPSRKTQLW--RSAAILLPTRRRCAPPRASSR 63
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDF 443
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
>At2g07240.1 68415.m00831 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 928
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 159 VNYNNILRTIKLTEITSL--N*AAGRGLLEAATRVRLEALPVYNGGARLVVLLFRDPHLL 332
+++ ++ +IK E+ L A +GLL A V LEA+P G ++ ++ D
Sbjct: 111 LSFEMMMTSIKEREVEQLATTCVAVQGLLYALQLVVLEAVPAIQEGPQIDEVVLSD---- 166
Query: 333 EGREGGEDRSTDPYGVLPLWRSNDLNLHC 419
E D +T P L L + +++ +C
Sbjct: 167 SDAEAAADVATRPGVALKLGNAKNVDSNC 195
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 282 NGGARLVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVG 461
NGG R+ +L + EG E + Y +P W N+L+ C G+ + +G
Sbjct: 191 NGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWW--NELS-EC--GKGGLSVKPKMG 245
Query: 462 DSRGTWWYPPDNTVLATSPYG 524
D+ W PD T+ +S +G
Sbjct: 246 DALLFWSMTPDATLDPSSLHG 266
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 443 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 297
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 357 RSTDPYGV--LPLWRSNDLNLHCRWGESCDFLL 449
+S DP GV LP+ S DL L C W ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,877,860
Number of Sequences: 28952
Number of extensions: 273539
Number of successful extensions: 795
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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