Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0775
         (321 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    39   0.025
UniRef50_A7ERK8 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_Q9H024 Cluster: Putative uncharacterized protein DKFZp5...    31   3.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +1

Query: 217 WVDKLTAHLVSNGTGAHKTYHNVNAPPT 300
           WVD+LTAHLV +G  + +  ++VNAPPT
Sbjct: 159 WVDELTAHLVLSGYWSPRHLYDVNAPPT 186


>UniRef50_A7ERK8 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 287

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 149 RKRLCFILCPDDEVNIKNSYCLNGWTSSQPTWCQMVLEPIRHTTT 283
           R+ + F   PD E  I N  CL+G   SQ    +  L P ++TTT
Sbjct: 70  RRTISFSSSPDQEYLISNVPCLHGLDFSQVPRVKFELNPFQYTTT 114


>UniRef50_Q9H024 Cluster: Putative uncharacterized protein
           DKFZp547J036; n=1; Homo sapiens|Rep: Putative
           uncharacterized protein DKFZp547J036 - Homo sapiens
           (Human)
          Length = 234

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 234 CELVHPFKQ*EFFIFTSSSGHSIKQSRFLGPYICLNL 124
           C L  PF+   FF+F   SGHS  +SR   P  CL++
Sbjct: 196 CHLPIPFRFVGFFVFPDCSGHS-PRSRAPAPGFCLDI 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,413,542
Number of Sequences: 1657284
Number of extensions: 5151278
Number of successful extensions: 11012
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11012
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)