Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0775
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.26 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   5.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   7.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.3  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 125 RFKHI*GPRKRLCFILCPDDEVNIKNSYCLNGWTS 229
           + ++I GPRKRL F        NIK    +N W S
Sbjct: 279 QIRNIRGPRKRLRFAYVTRTGANIK-KLIVNTWIS 312


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/30 (23%), Positives = 13/30 (43%)
 Frame = +2

Query: 191 NIKNSYCLNGWTSSQPTWCQMVLEPIRHTT 280
           N+K    + GW     T+ Q+  +  +  T
Sbjct: 95  NLKTLIAIGGWNEGSETYSQVAADAAKRAT 124


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +2

Query: 47  KNINHLYSNNSIY*KKPHQNPVRSF*RFKHI*GPRKRLCFILCPDDEVNIKNSY 208
           K ++H++++      KP    V  F RFKH  G      F+  P     ++  Y
Sbjct: 230 KFMSHIHNDGD---NKPDTILVNGFGRFKHFVGADNSTVFV--PTARFTVEQGY 278


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 93  NRIKIRCVAFKDSSIYRVRESDFVLY 170
           N I+IRC+     S Y     DF  +
Sbjct: 73  NSIQIRCIESNMISFYLEATDDFAYF 98


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 244 VSNGTGAHKTYH 279
           + +G  AHKT+H
Sbjct: 267 IQHGDDAHKTHH 278


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +2

Query: 170 LCPDDEVNIKNSYCLN 217
           +CPD +++  N  C++
Sbjct: 108 ICPDGKLSCGNGECID 123


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +2

Query: 170 LCPDDEVNIKNSYCLN 217
           +CPD +++  N  C++
Sbjct: 115 ICPDGKLSCGNGECID 130


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 38  KIKKNINHLYSNNSI 82
           +IKKN+   Y N  I
Sbjct: 89  QIKKNVTRAYCNKKI 103


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 38  KIKKNINHLYSNNSI 82
           +IKKN+   Y N  I
Sbjct: 89  QIKKNVTRAYCNKKI 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,589
Number of Sequences: 336
Number of extensions: 1410
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)