Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0775
         (321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0298 - 7061908-7061913,7061952-7062032,7062363-7062564,706...    26   7.6  
05_04_0203 + 19016547-19016860,19017020-19017169,19017946-190180...    26   7.6  

>09_02_0298 -
           7061908-7061913,7061952-7062032,7062363-7062564,
           7062665-7062890,7063030-7063143,7063213-7063270
          Length = 228

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 170 LCPDDEVNIKNSYCLNGWTS-SQPTWCQMVLEP 265
           L  +D  N KN+ CL GW    +  W Q+V  P
Sbjct: 175 LATEDAENFKNTECL-GWRHYVKSDWTQLVASP 206


>05_04_0203 +
           19016547-19016860,19017020-19017169,19017946-19018081,
           19018222-19018323,19018556-19018675,19018800-19018880,
           19019041-19019381,19020296-19020589,19020701-19021025,
           19021167-19021400,19021506-19021760
          Length = 783

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 284 TLWYVLWAPVPFDTRW 237
           TLW   WAP P D  W
Sbjct: 343 TLWLTEWAPEPRDVFW 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,088,025
Number of Sequences: 37544
Number of extensions: 138088
Number of successful extensions: 272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)