BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0775 (321 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC011875-1|AAH11875.1| 234|Homo sapiens ELAVL3 protein protein. 31 0.58 AL512714-1|CAC21655.1| 234|Homo sapiens hypothetical protein pr... 31 0.58 AB065855-1|BAC06073.1| 324|Homo sapiens seven transmembrane hel... 29 3.1 AK125769-1|BAC86281.1| 125|Homo sapiens protein ( Homo sapiens ... 28 7.2 >BC011875-1|AAH11875.1| 234|Homo sapiens ELAVL3 protein protein. Length = 234 Score = 31.5 bits (68), Expect = 0.58 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 Query: 234 CELVHPFKQ*EFFIFTSSSGHSIKQSRFLGPYICLNL 124 C L PF+ FF+F SGHS +SR P CL++ Sbjct: 196 CHLPIPFRFVGFFVFPDCSGHS-PRSRAPAPGFCLDI 231 >AL512714-1|CAC21655.1| 234|Homo sapiens hypothetical protein protein. Length = 234 Score = 31.5 bits (68), Expect = 0.58 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 Query: 234 CELVHPFKQ*EFFIFTSSSGHSIKQSRFLGPYICLNL 124 C L PF+ FF+F SGHS +SR P CL++ Sbjct: 196 CHLPIPFRFVGFFVFPDCSGHS-PRSRAPAPGFCLDI 231 >AB065855-1|BAC06073.1| 324|Homo sapiens seven transmembrane helix receptor protein. Length = 324 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 308 ISRVG-GAFTLWYVLWAPVPFDTRWAVSLSTHLSNKNFLYLLHHQDIV 168 ++++G A T +V + P+PF +W TH +F HQDI+ Sbjct: 154 VAKIGLSALTRGFVFFFPLPFILKWLSYCQTHTVTHSFCL---HQDIM 198 >AK125769-1|BAC86281.1| 125|Homo sapiens protein ( Homo sapiens cDNA FLJ43781 fis, clone TESTI2051767. ). Length = 125 Score = 27.9 bits (59), Expect = 7.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = -1 Query: 294 WRIYVVVCLMGSSTI*HQVGCELVHPFKQ*EFFIFTSSSGHSIKQSRFLGPYI 136 W ++++V + G + C +HP +F T SG S S +L P+I Sbjct: 52 WTVWLIVVVQGQVMCHPSLKC--LHPVNCLAYFPLTPGSGPSSLLSPYLSPHI 102 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 44,641,141 Number of Sequences: 237096 Number of extensions: 803866 Number of successful extensions: 4853 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4853 length of database: 76,859,062 effective HSP length: 79 effective length of database: 58,128,478 effective search space used: 1569468906 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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