Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0775
         (321 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-5|AAA82425.1|  153|Caenorhabditis elegans Hypothetical pr...    29   0.99 
AF047663-4|AAY86320.1|  107|Caenorhabditis elegans Hypothetical ...    29   0.99 
Z81105-5|CAB03218.2|  331|Caenorhabditis elegans Hypothetical pr...    28   1.3  
Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical pr...    28   1.7  
U58727-4|AAB00584.2|  148|Caenorhabditis elegans Hypothetical pr...    26   5.3  
L23648-14|AAM48527.1|  573|Caenorhabditis elegans Dipeptidyl pep...    25   9.2  
L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl pep...    25   9.2  

>U41264-5|AAA82425.1|  153|Caenorhabditis elegans Hypothetical
           protein F10E7.6 protein.
          Length = 153

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 10  AAEFSGRGSKNKKKYKPSLF-K*LYLLKKTASKSGA*LLKIQAYIG 144
           +A F GRGS+   ++KP  +    Y  KK  S  G+ L+ I  Y G
Sbjct: 32  SAAFQGRGSRGMPQFKPDYYSSDAYANKKVLSAIGS-LIAIVIYFG 76


>AF047663-4|AAY86320.1|  107|Caenorhabditis elegans Hypothetical
           protein W09G12.10 protein.
          Length = 107

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 260 PVPFDTRWAVSLSTHLSNKNFLYLLHHQ 177
           PVP +TR  +S++  LS  +FLYL++ Q
Sbjct: 20  PVPLNTRQVLSVTITLSIFSFLYLVYAQ 47


>Z81105-5|CAB03218.2|  331|Caenorhabditis elegans Hypothetical
           protein R05D7.5 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 149 RKRL-CFILCPDDEVNIKNSYCLNGWTSSQPTWCQMVLEPIRHTTT*MRH 295
           R RL CF L P   VN     C+    S  PT C  V+  I +T    RH
Sbjct: 16  RNRLTCFCLLPASFVNRHIYVCIPNSFSPLPTGCFFVVTEISNTYQNRRH 65


>Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical
           protein F13E9.5 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 176 PDDEVNIKNSYCLNGWTSSQPTWCQMVLEPI 268
           P +EV  KN Y LN    ++P W  +V +P+
Sbjct: 161 PKEEVEAKNRYALNAIVDNKPFW--LVGDPV 189


>U58727-4|AAB00584.2|  148|Caenorhabditis elegans Hypothetical
           protein D1005.5 protein.
          Length = 148

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 93  NRIKIRCVAFKDSSIYRVRESD 158
           NR+K +CV+F + S+Y V E++
Sbjct: 82  NRVK-KCVSFNNGSLYHVSETE 102


>L23648-14|AAM48527.1|  573|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform c protein.
          Length = 573

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 203 NFLYLLHHQDIV*NKVAFSDPIYA*IFKSYAPD 105
           N L + H  DI+  +V F DP Y+ +  S +PD
Sbjct: 10  NLLIITHAIDIIPREVLFQDPKYSSV--SLSPD 40


>L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform a protein.
          Length = 740

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 203 NFLYLLHHQDIV*NKVAFSDPIYA*IFKSYAPD 105
           N L + H  DI+  +V F DP Y+ +  S +PD
Sbjct: 10  NLLIITHAIDIIPREVLFQDPKYSSV--SLSPD 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,879,513
Number of Sequences: 27780
Number of extensions: 123416
Number of successful extensions: 247
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)