Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0774
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021457-1|AAX33605.1|  381|Drosophila melanogaster AT17750p pro...    31   1.7  
AY089238-1|AAL89976.1|  381|Drosophila melanogaster AT02742p pro...    31   1.7  
AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-P...    31   1.7  
AE014134-2373|AAF53316.1|  301|Drosophila melanogaster CG16853-P...    29   6.9  

>BT021457-1|AAX33605.1|  381|Drosophila melanogaster AT17750p
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 330 GGPYDRLPTRVIII-KKVNFYAIENVKTRTKHSD 232
           G P  R+P+R+ I+ KKV  YA   ++TR  H D
Sbjct: 190 GEPKQRIPSRMCIVCKKVKTYAEFAIRTRQSHVD 223


>AY089238-1|AAL89976.1|  381|Drosophila melanogaster AT02742p
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 330 GGPYDRLPTRVIII-KKVNFYAIENVKTRTKHSD 232
           G P  R+P+R+ I+ KKV  YA   ++TR  H D
Sbjct: 190 GEPKQRIPSRMCIVCKKVKTYAEFAIRTRQSHVD 223


>AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-PA
           protein.
          Length = 706

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 330 GGPYDRLPTRVIII-KKVNFYAIENVKTRTKHSD 232
           G P  R+P+R+ I+ KKV  YA   ++TR  H D
Sbjct: 515 GEPKQRIPSRMCIVCKKVKTYAEFAIRTRQSHVD 548


>AE014134-2373|AAF53316.1|  301|Drosophila melanogaster CG16853-PA
           protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 146 FFVYLQIKNGTILCTGFFVATLWFASSTRSLCLVRVLTFS 265
           F + LQ+    + C GFFVA +  ++S  +    R LTFS
Sbjct: 223 FCLCLQVNKDCVFCLGFFVAFV-ISASFLTAFFYRTLTFS 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,632,047
Number of Sequences: 53049
Number of extensions: 462152
Number of successful extensions: 1039
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)