Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0774
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    30   1.6  
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin...    29   2.8  
AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF125959-3|AAD14731.1|  531|Caenorhabditis elegans Udp-glucurono...    28   4.8  

>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 454 IRLVFFACLCFILTVNLLLSIL 519
           +RL+ F+CLCF+L VN    IL
Sbjct: 1   MRLLTFSCLCFLLKVNYAAKIL 22


>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
           protein protein16, isoform d protein.
          Length = 1030

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = -2

Query: 342 HSPSGGPYDRLPTRVIIIKKVNFYAIENVKTRTKHSDLVEDANHN 208
           H+PSGG Y   P  + ++KK    +++ + + T + +++   N++
Sbjct: 696 HAPSGGFYPHAPNAIKVVKK-RAQSVQGLLSPTDNVEVIHQRNYH 739


>AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical
           protein C49A9.8 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 312 LPTRVIIIKKVNFYAIENVKTRTKHSDLVEDANHNVATKKPV 187
           LP +++I    N Y   ++K     +D + DA HNV   +P+
Sbjct: 18  LPYKILIYS--NLYGHSHIKVLNTVADTLTDAGHNVTIFRPI 57


>AF125959-3|AAD14731.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein14 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 273 YAIENVKTRTKHSDLVEDANHNVATKKPVH 184
           +A  +VK  T+ +D++ D  HNV   +P H
Sbjct: 28  FAFSHVKFVTQMADIIADHGHNVTLFQPYH 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,096,869
Number of Sequences: 27780
Number of extensions: 256139
Number of successful extensions: 699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)