Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0773
         (381 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.59 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   4.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   4.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   4.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   4.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   4.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   4.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   5.5  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 304 PVCPGSCRSPTISNSSPSNYS 366
           P C  +  SPT S+SS S++S
Sbjct: 194 PTCSEASSSPTPSHSSESSFS 214


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 80  RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 114


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 379 RSTPANSCSANYSILLDSGSFPDRPVSTMSSSTPA 275
           RSTP  S  +N +    SG      VST     PA
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPA 158


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +1

Query: 148 YRRSLG*FGARRIGSKLLGFAHRCLINCKSEGNM 249
           YR   G F  + I + L    H   +   S+G +
Sbjct: 36  YRNGEGSFKPQNINANLCTHVHYAFLGVNSDGTL 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,043
Number of Sequences: 336
Number of extensions: 1795
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)