Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0770
         (591 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SLK2 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.9  
UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  

>UniRef50_A7SLK2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 394

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -2

Query: 326 RLSLKCLYCNVLIFFFHIIFINCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFVL 159
           RL +   YC++ +F    I   C + I  +C L+V I+ +H  +  +  + S+FVL
Sbjct: 280 RLFMIYAYCSLFVFI--TIVHACLFMIYAYCSLFVLITIVHARLFMIYAYCSLFVL 333



 Score = 33.5 bits (73), Expect = 3.8
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -2

Query: 305 YCNVLIFFFHIIFINCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFVL 159
           YC++ +F    I   C + I  +C L+V I+ +H  +  +  + S+FVL
Sbjct: 87  YCSLFVFI--TIVHACLFMIYAYCSLFVLITIVHACLFMIYAYCSLFVL 133


>UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4638

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 350  IQICNYY*RLSLKCLYCNVLIFFFHIIFINCQYTI-VIFCKLYVHISELHIII 195
            I  CN Y  + ++CLY  +L+FFF  +     Y I   + K ++  ++ H+++
Sbjct: 2771 INFCNIYNDIIIECLYIQLLLFFFKYMIQTLSYEISKEYTKNFLCHTKRHLLV 2823


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,691,481
Number of Sequences: 1657284
Number of extensions: 7008415
Number of successful extensions: 15247
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15231
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)