Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0770
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.022
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.48 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.48 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.022
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 344 ICNYY*RLSLKCLYCNVLIFFFHIIFINCQYTIVIFCKLYVHISELHI---IIIKVTRFS 174
           +C YY         C  +IF  H++F+ C Y    +C L + +   +     II  T F 
Sbjct: 256 VCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY--YFYCALIILLCIYYFCRAFIIFPTHFY 313

Query: 173 SVFVLY 156
             F LY
Sbjct: 314 CAFSLY 319



 Score = 27.1 bits (57), Expect = 0.12
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -2

Query: 323 LSLKCLYCNVLIFFFHIIFINCQYTIVIFCKLYVHISELHIIIIKVTRFSSVFVLY 156
           L +   YC  +IF  H++F+ C Y    FC     I  +H++      F ++ +L+
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYH--FFCAFI--IFTMHLLFCCAFIFFNMHLLF 195



 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -2

Query: 335 YY*RLSLKCLYC---NVLIFFFHIIFINCQYTIVI 240
           YY  + L C+Y      +IF  H++F+ C Y  V+
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 305 YCNVLIFFFHIIFINCQ--YTIVIFCKLYVHISELHIIIIKVTRFSSVFVLYC 153
           YC  + F  H++F+ C   +T+ +       I  +H ++     + +  +L C
Sbjct: 60  YCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLC 112


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 242 IFCKLYVHISELHIIIIKVTRFSSVFVLYCDGNVATPAF*TSVTLVLPQF 93
           ++  + +H+S L  I+  +T     F  Y  G      F   +T++LP F
Sbjct: 140 LYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYF 189


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 242 IFCKLYVHISELHIIIIKVTRFSSVFVLYCDGNVATPAF*TSVTLVLPQF 93
           ++  + +H+S L  I+  +T     F  Y  G      F   +T++LP F
Sbjct: 140 LYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYF 189


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 305 YCNVLIFFFHIIFINCQY 252
           YCN +I F+  +F+   Y
Sbjct: 321 YCNFIILFYLSVFVILVY 338


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 251 TIVIFCKLYVHISELHIIIIKVTR-FSSVFVLY 156
           T + FC    H+  LH  ++KV +  +S++ L+
Sbjct: 222 TELTFCNKIKHLVNLHKNLVKVAKDHNSLYSLH 254



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -2

Query: 305 YCNVLIFFFHIIFINCQYTIVIFCKLYVHISELHIIII 192
           Y  + +FFFH+   + +Y +V++    V +  L + I+
Sbjct: 271 YIVMYVFFFHL--SDVRYVMVVYLLKNVVLYGLELFIL 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,197
Number of Sequences: 336
Number of extensions: 2130
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)